KEGG   Halomonas sp. SS10-MC5: I4484_00595
Entry
I4484_00595       CDS       T07024                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
hcam  Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:hcam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcam02044]
    I4484_00595 (tssC)
Secretion system [BR:hcam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I4484_00595 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QPP49669
LinkDB
Position
124797..126278
AA seq 493 aa
MSDMAQAQGQAAEAQAEGSLLDQVMAQTRMAPTEEGYDIAKQGVAAFIAELLQSKDDAPQ
VNKAVVDRMIVELDRKIGSQVDAILHDRGFQQIESAWRGLKLLVDRTDFRQNIKLDLLHA
TKEELLEDFEFAPELSQSGLYQHVYAAEYGQFGGEPVGAIIGNYDFTPSTPDIKLLQFTA
AVGAMAHAPFLSSVAPSFFGIDSFQELPNIKDFKAIFEGPKYARWRSLRESEDARYLGLT
APRFLLRMPYDPVENPVKTFHYRETVSEDHEHYLWGNTAYLLAERLTDSFAKYRWCPNII
GPQSGGAVENLPVHTYEALGQLQAKIPTEVLVTDRREFEMSEEGFISLTMRKGSDNAAFF
SANSVQKPKVFPNTPEGKAAETNYKLGTQLPYMFIVNRLAHYIKVLQREQIGSWKERQDL
ERELNVWIRQYVADQENPPAEVRSRRPLRAASIQVSDVEGDPGWYQVSLAVRPHFKYMGA
NFELSLVGRLDKE
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcgacatggcacaagcgcaggggcaggccgccgaggcccaggccgaaggttccctt
ctcgatcaggtgatggcacagacccgcatggcgccgaccgaggaaggctacgatatcgcc
aagcagggcgtggccgccttcatcgccgagctgctgcagagcaaggacgatgcgccgcag
gtcaacaaggcggtggtcgaccgcatgatcgtcgagctcgaccgcaagatcggcagccag
gtcgacgcgattctccacgaccgcggcttccagcagatcgaatcggcctggcgcggcctc
aagctgctggtcgatcgcaccgacttccgtcagaacatcaagctcgacctgctgcacgcc
acgaaggaggagctgctggaggatttcgagttcgcccccgagctcagccagagcgggctc
taccagcacgtctacgcggccgagtacggccagttcggcggcgagccggtaggcgcgatc
atcggcaactacgacttcacgccctcgacgcccgacatcaagctgctgcagttcaccgcc
gcggtgggcgccatggcccacgcgccgttcctctcctcggtggcgccgagtttcttcggc
atcgacagcttccaggagctgcccaacatcaaggacttcaaggcgatcttcgagggaccg
aagtacgcccgctggcgcagcctgcgcgagtccgaggacgcccgctacctgggcctgacg
gcgccgcgcttcctgctgcgcatgccctacgacccggtggagaacccggtcaagaccttc
cactaccgcgaaacggtcagcgaggaccacgagcactacctgtggggcaacaccgcctac
ctgcttgccgagcgcctcaccgacagcttcgccaagtaccgctggtgccccaacatcatc
gggccgcagagcggcggcgcggtggagaacctgccggtgcatacctacgaggcgctgggc
cagctgcaggccaagatccccaccgaagtgctggtcaccgaccgccgcgagttcgagatg
tccgaagagggcttcatctcgctgaccatgcgcaagggtagcgacaacgccgccttcttc
tccgccaactcggtgcagaagcccaaggtcttccccaacacgcccgagggcaaggccgcc
gagaccaactacaagctcggcacccagctgccctacatgttcatcgtcaaccgcctggcg
cactacatcaaggtgctgcagcgcgagcagatcggctcctggaaggagcgccaggacctc
gagcgcgagctcaacgtgtggatccgccagtacgtcgccgaccaggagaacccgccggcc
gaggtgcgcagccgccgtccgctgcgggccgcctcgatccaggtctccgacgtcgagggc
gacccgggctggtaccaggtgtccttggccgtgcgtccgcacttcaagtacatgggcgcc
aacttcgagctgtcgctggtggggcgcctggacaaggagtaa

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