KEGG   Halomonas sp. SS10-MC5: I4484_00635
Entry
I4484_00635       CDS       T07024                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hcam  Halomonas sp. SS10-MC5
Pathway
hcam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I4484_00635 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcam02044]
    I4484_00635 (tssH)
Secretion system [BR:hcam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I4484_00635 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 TniB AAA_7 Clp_N NACHT bpMoxR AAA_14 CENP-H AAA_25 Sigma54_activat DUF815 ResIII NBD_SMAX1 SLFN-g3_helicase GTP-bdg_M AAA_6 DUF1192
Other DBs
NCBI-ProteinID: QPP49676
UniProt: A0A7T1Y454
LinkDB
Position
133692..136421
AA seq 909 aa
MLRVELPALIGRLNAVSRQGLEQAAVLCAEQQAPEVTAGHLLLALIDQPLCDLRCLLDGQ
GIDVHELRARLAEETRPPRDLAVTTPSFSPLLVELLQDAWLLATTEFAYDSLRSGLIFTA
LLHNVGRYLGPRSAALLAEINREGLRRGFERLAADSAEAPRAEPNEGGRRQDQATQGDSA
LARFATSLTEQARRGELDPVLCRDPEIDQMLDILGRRRKNNPIVIGDAGVGKSAVVEGLA
ARIVEGRVPAALADVELMSLDLGALQAGAAVKGEFEKRLKAVIEEVKAAPRPILLFIDEA
HTLIGAGNQEGGGDAANLLKPALARGELRTIAATTWREYKKYFEKDPALSRRFQPVALAE
PSIDQALVILRGLRDTYETAHGVLVGDSGLRAAAELSARYLAGRKLPDKAIDVLDTACAR
LSQALDTPPRRLSHLQSEHLAARRERDQLDRERLLGRSPDATREAELDVRLARLEAEVER
LEAAWADQRECVDAIIALHRQLLAAGQVEANPEQPVVETAIDDETGGENDADSTIDGEAA
ADAVESDDSAADVDLHAQLAAHEARLAELQQEYALVNASVEEAQIAQVIGDWTGVPVERM
TSDELTRLTELPEHLGRLVQGQDTAIERVHRHLLTARADLRRPGRPLGAFLLVGPSGVGK
TETVVQIAERLYGGRQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGLLTEAIRQRPY
SVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRLIDCKNVVFFLTSNLGYEAIVAHVDD
PAALDDALYPVLAGFFKPALLARMEVVPYFPLGADTLRDIVVAKLDTLAERIRTRHRQAE
VVLDEALRDAICVRATRSENGARMLESVIDGELLPPVSRALLDRLARREPVTRVALGVDA
AGAFTAEVV
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgctcagggtagagcttcccgcgctcatcggccgcctcaacgccgtctcccgtcaaggc
ctggaacaggccgccgtgctgtgcgccgagcagcaggcacccgaggtcaccgccggtcac
ctgctgctggcgctgatcgatcagccgctgtgcgacctgcgctgcctgctcgacgggcag
ggcatcgatgtccatgagctgcgtgcgagactggccgaggagacacggccgccgcgcgac
ctggcagtgaccacgccgagcttctcgccgctgctggtcgagctgctgcaggacgcctgg
ctgctggccacgaccgaattcgcctacgacagcctgcgcagcggcctgatcttcactgcc
ctgctgcacaacgtcggacgctacctggggccgaggagcgccgcgctgctggccgagatc
aaccgcgaggggctgcgtcgcggcttcgagcggctggccgccgactccgccgaggctccc
cgcgccgagccgaacgagggcgggcgccgccaggaccaggccacccagggcgacagcgcc
ctggcgcgcttcgccacctcgctcaccgagcaggcccggcgcggcgagctcgacccggtg
ctgtgccgcgaccccgagatcgatcagatgctcgacatcctcgggcggcggcgcaagaac
aaccccatcgtcatcggcgatgccggggtgggcaagagcgccgtggtggaagggcttgcc
gcacgcatcgtcgagggccgcgtgccggcggcgctggccgacgtcgaactgatgagcctc
gacctcggcgcactgcaggccggcgccgcagtgaagggcgagttcgagaagcgcctcaag
gcggtgatcgaggaggtcaaggccgcgccccggccgatcctgctgttcatcgacgaggcc
cacaccctgatcggtgccggcaaccaggagggcggcggcgatgccgccaacctgctcaag
ccggccctggcgcgcggcgagctgcgcaccatcgctgccaccacctggcgcgagtacaag
aagtacttcgagaaggacccggcgctgtcgcggcgcttccagccggtggccctggccgag
cccagcatcgatcaggcgctggtgatcctgcgcggcctgcgcgacacctacgagaccgcc
cacggcgtgctggtcggcgacagcggcctgcgcgccgccgccgaactctcggcgcgctac
ctggccggccgcaagctgcccgacaaggcgatcgacgtgctcgacaccgcctgcgcgcgg
ctctcccaggcgctggacaccccgccgcgccggctcagccatctccagagcgaacacctg
gccgcgcgccgcgagcgcgaccagctcgaccgcgagcgcctgctggggcgcagccccgat
gcgacccgcgaggccgagctcgacgtccgtctggcgcggctggaagcagaggtcgaacgg
ctcgaggcggcctgggccgaccagcgcgagtgcgtcgatgccatcatcgccctgcatcgc
cagctgctggccgcgggccaggttgaggccaaccccgagcagccggtagtcgagactgca
atcgacgatgaaaccggcggggagaacgacgctgacagcacaatcgacggcgaagcggcg
gctgacgcggttgagtcggatgactctgccgctgatgtcgatctgcatgcccaactggcc
gcccacgaggcgcgcctggccgagttgcagcaggagtacgccctggtcaatgccagcgtc
gaggaggcgcagatcgcccaggtcatcggcgactggaccggcgtgccggtggagcgcatg
accagcgacgagctgacccggctcaccgagctgcccgagcatctcggccggctggtgcag
ggccaggacacggccatcgagcgggtgcaccgccatctgctcaccgcccgcgccgacctg
cggcgccccggccgcccgctgggcgccttcctgctggtcggccccagcggcgtgggcaag
accgagaccgtggtgcagatcgcggaacggctctacggcgggcgccagttcctcaccacc
atcaacatgtcggagtaccaggagaagcacaccgtgtcgcggctgatcggttcgccgccg
ggctacgtgggcttcggcgaagggggcctgttgaccgaggcgattcgccagcgcccctac
tcggtggtgctgctcgacgaggtcgagaaggcccacccggacgtgctcaacctgttctac
caggccttcgacaagggcgagttggccgacggtgaggggcgcctgatcgactgcaagaac
gtggtgttcttcctcacctcgaacctgggctatgaggccatcgtggcccacgtcgacgac
cccgcggcgctggacgacgcgctctacccggtgctggccggcttcttcaagccggcgttg
ctggcgcgcatggaggtagtgccctacttcccgctgggcgccgacaccctgcgcgacatc
gtggtagccaagctcgacaccttggccgagcgcatccgcacgcgccaccgccaggccgag
gtggtgctcgacgaggccctgcgcgatgccatctgtgtgcgcgccacgcgcagcgagaac
ggcgcgcgcatgctcgagtcggtgatcgacggcgagctgctgccgccggtgtcgagggcg
ctgctcgaccgcctggcgcggcgcgagccggtcacccgggtggcgctgggcgtcgatgcg
gcgggcgccttcaccgcggaggtggtatag

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