KEGG   Halomonas sp. SS10-MC5: I4484_00655
Entry
I4484_00655       CDS       T07024                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
hcam  Halomonas sp. SS10-MC5
Pathway
hcam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I4484_00655 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcam02044]
    I4484_00655 (tssM)
Secretion system [BR:hcam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I4484_00655 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4131 MMR_HSR1
Other DBs
NCBI-ProteinID: QPP49680
UniProt: A0A7T1Y461
LinkDB
Position
140185..143850
AA seq 1221 aa
MWKSVKSGLSRWVPGVSRAQSNANLAKAHGNKAQGLGKQASKLTAVLWWLLLAALVAAIW
WLGPMWQVRDSYPLAPWLNRLLATLALATLAALVWGIRLARRLREVNDERRQNERRQLDP
TLVQVEQQEARLNATLHELLDNLGAGPGARYKLPWYLVMGVENAGKTSLINRSGQNFSLT
HVMKASGQGKKGNQFGFDWWIGDKAVLIDPDGELLTQGALEGGEPQEVQSRLWDHFVGWL
ERNRAQCPLDGVVLVLDLARLSDARVAVRKAYASLLRARLRELMERHGARLPVYVTFSKM
DLLHGFDDFFRHYSRAARRAPLGFTFSAESLEHVDQWVDEFADAYDAMLERLNRSLPTLL
AECRDREERESVFRFVRQLAGLRDVLHGFLHEALSSDRYSTAAMVRGTYFTSVYQQGVPE
DPFVDAAARRYGMADTTQPAHRAARSALYFTEELFDKVIYPEAGLAGDNARAARRRRRVR
RASAFACLLAGLGLVGGWSHFYQKNTQALAAVEEKAQDFLAAQPDELRSDDPTGYALLEP
LDRLRAATLEFGDYREHLPWLADMGLYQGHAVGREVEDAYLAMLSYHFLPSLMIGIMDDM
NRAEAGSNDKLALLRVLRMMSDASGRQPERVQDFMARRWQRAFPQRGSVQERLLEHLAYA
MAHTDLEGRVAAGDRHAEQAMAALRGSLQAAQEELSRQPMDERVYATLKANSGSRSGAAL
DLHQGVGPSFNAVFMARDDELERLRLPTLLTRDGFEGYFLKEIEQATELALIDLWVLGQR
DDIVFSAADERQLRDALHERYVSDYHVIWRQALDDLYLVPLPDIDQAVVVADTLLGASRP
LDRLLGEVAHHTQLYPELPVDDEVARQALERSPRYRLAGEIERNFRDLNGLLEARGDNPA
DIAEIKVAIGELRDYLREVQGASDPGRAAFVSARDRLALRGGDPIHNLKRIAENTPAPVD
RMLESLADQSWQLLMASAIRHLEHQWLDEVVAPYQERLAGRYPLVPSASREVALNDFEAF
FAAGGILDRFYQDNLRPFIEEAPEYLVDAEGSPLLRDSVFTAIQRAEQIRQAYFGRDGVL
DVEFALEPVSLSPDKRRSVINIDGQIIDYAHSASSRVSMIWPNALRGGNESRITLVPSQV
NRSPRSLSRDGAWAWFRLLDEAEITSASERDLELRFQVDGGSARYRLYATGSRNPFTRPL
VAGFQLPTALYAEGGFDVGSL
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgtggaaaagtgtgaagtccggtctgagtcgctgggtacccggcgtctcacgggcacaa
agcaacgccaacctggccaaggcgcacggcaacaaggcccagggcctcggcaagcaggcg
agcaagctcaccgcggtgctctggtggctgctgctggcggcgctggtggccgccatctgg
tggctgggcccgatgtggcaggtgcgcgacagctatccgctggcgccctggctcaaccgg
ctgctcgccaccctggcgctggccaccttggccgccctggtctggggtatccgcctggct
cgccggctgcgcgaagtgaacgacgaacgacgccagaacgagcggcggcagctcgacccg
acgctggtccaggtggagcagcaggaggcgaggctgaacgccacccttcacgaactgctc
gacaacctcggtgccggccccggcgcgcgctacaagctgccctggtacctggtgatgggc
gtggagaacgccggcaagaccagcctgatcaaccgttccggccagaatttctcgctgacc
cacgtgatgaaggcgtcgggccagggcaagaagggcaaccagttcggcttcgactggtgg
atcggcgacaaggcggtactgatcgaccccgacggcgagctgctgacccagggggcgctg
gagggcggggagccccaggaagtgcagagccggttgtgggatcacttcgtcggctggctg
gagcgcaaccgtgcccagtgtccgctcgacggcgtggtgctggtgctcgacctggcgcgg
ctcagcgatgcccgggtggcggtgcgcaaggcctatgcctcgctgctgcgcgctcgcctg
cgtgagctgatggaacgccacggcgcccgcctgccggtctacgtcaccttcagcaagatg
gacctgctgcacgggttcgatgacttcttccgccactactcccgggccgcccggcgtgca
ccgctcggcttcaccttcagcgccgagagcctggagcacgtcgatcagtgggtcgacgag
tttgcagacgcctacgacgccatgctcgagcggctcaaccgcagcctgcccacgctgctg
gccgagtgtcgcgaccgcgaggagcgcgagtcggtattccgcttcgtgcgtcagctcgcc
ggcctgcgcgacgtgctgcatggtttcctgcacgaggcgctctccagcgaccgctactcc
accgccgccatggtgcgcggcacctacttcacctcggtctaccagcagggcgtgccggag
gatcccttcgtcgacgccgccgcgcgccgctacggcatggccgacaccacccagccggcc
caccgtgccgcacgcagcgcgctctacttcaccgaggaactgttcgacaaggtgatatac
cccgaggcggggttggcgggtgacaacgcccgcgccgcccggcgtcggcgccgtgtgcgg
cgtgccagcgccttcgcctgcctgctggccgggctggggctggtgggcggctggagccac
ttctatcagaagaacacccaggccttggcggcggtcgaggagaaggcccaggacttcctg
gccgcccagcccgacgagctgcgcagcgacgaccccaccggctatgcgctgctggagccc
ctcgaccgcctgcgtgccgccaccctggagttcggcgactaccgcgagcatctgccgtgg
ctggccgacatgggactctaccagggccatgcagtgggacgtgaggtggaggacgcctat
ctggcgatgctgagctaccattttctgccctcgctgatgatcggcatcatggacgacatg
aatcgtgccgaggcgggcagcaacgacaagctcgccctgctgcgcgtgctgcgcatgatg
tccgatgccagcggccgccagccggagcgggtccaggattttatggcgcggcgctggcag
cgcgccttcccccagcgcggcagcgtccaggagcgcctgctcgaacatctcgcctatgcc
atggcgcataccgatctcgaagggcgcgtggcggccggcgatcgtcatgccgaacaggcc
atggcggcgctgcgcggcagcctgcaggccgcccaggaggaactctcgcgccagccgatg
gacgagcgcgtctatgccaccctcaaggccaacagcggcagccgcagcggtgcggcgctc
gacctgcaccagggcgtcggcccgtcgttcaatgccgtgttcatggcccgcgacgacgag
ctggagcgcctgcggctgccgaccctgctgactcgcgacggcttcgagggctatttcctc
aaggagatcgagcaggccaccgagctggcattgatcgacctctgggtgctgggccagcgc
gacgacatcgtcttcagtgccgccgacgagcgccagctgcgcgatgccctgcacgaacgc
tacgtcagcgactatcacgtgatctggcgccaggcactcgacgacctttacctggtgccg
ctgcccgacatcgaccaggccgtagtggtggccgacaccctgctcggcgccagccggccg
ttggaccgtctgctcggtgaagtggcccatcacacgcagctctatcccgagctgccggtg
gacgacgaagtcgcacgccaggcgctggagcgctcgccgcgctatcgccttgccggtgag
atcgagcgtaacttccgcgacctcaacggcctgctcgaggcccgcggcgacaacccggcc
gacatcgccgagatcaaggtcgccatcggcgagctgcgcgactacctgcgcgaggtgcag
ggcgccagcgacccgggccgtgcggccttcgtcagtgcccgcgaccgcctggcgctgcgc
ggcggcgaccccatccacaacctcaagcgcattgccgagaacaccccggccccggtggac
cgcatgctcgagagcctggccgaccagagctggcagctactgatggccagtgccattcgc
catctcgagcatcagtggctcgacgaggtggtggcgccctaccaggagcgcctggcaggc
cgctacccgctggtacccagcgcctcgcgtgaggtggccctgaacgacttcgaggccttc
ttcgccgccggcggcattctcgaccgcttctaccaggacaacctgcgccccttcatcgag
gaagcccccgagtacctggtcgacgccgagggcagcccgctgctgcgtgacagcgtcttt
accgccatccagcgcgccgagcagatccgccaggcctacttcggccgcgacggcgtgctc
gacgtggagttcgccctggagccggtgagcctcagccccgacaagcgccgcagcgtgatc
aatatcgatggccagatcatcgattacgcccacagtgccagctcacgggtctcgatgatc
tggcccaacgccctgcgcggcggcaacgagagccgcatcactctggtgccgagccaggtc
aaccgctcgccgcgcagcctcagccgtgatggcgcctgggcctggttccgcctgctcgac
gaggccgagatcaccagtgccagcgagcgcgacctggagctgcgcttccaggtcgacggc
ggctcggcgcgctatcgcctgtacgccaccggctcgcgcaacccgttcacccgcccgctg
gtggccggcttccaactgcccactgcgctgtatgccgaaggaggtttcgatgttggcagc
ctttaa

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