Halomonas sp. SS10-MC5: I4484_03125
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Entry
I4484_03125 CDS
T07024
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I4484_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_03125
Enzymes [BR:
hcam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I4484_03125
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I4484_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4131
CbeA_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QPP50132
LinkDB
All DBs
Position
complement(677351..678691)
Genome browser
AA seq
446 aa
AA seq
DB search
MPQPTASALSVSEVNRRARLLLEQGIGEVWVEGELSGVSRPASGHVYFTLKDSSAQLRGA
LFRNRARFVAAPMRDGDRVRVRGRVSLFEPRGDYQLIAEAVQPAGEGELLLALERLKQRL
AAEGVFANARPLPCPPRHLLVLTSPTGAAIRDVLAVLAARWPLAHVTLIAVPVQGREAAP
ALIAALGLLNRQQALDPARDVILITRGGGSLEDLWAFNDEHLARAIFHSRLPVMSAVGHE
VDVTLSDLAADVRAPTPSAAAEMLVPDGRDLRQRLAGLERQLWRCTQARLEREGQRLDHL
RARLRHPGEVVARQRQTLGELEARLRRAMHMRLAADRRQLDHLQRRTSACHPRRGVERAG
ERLARARARLAQAMQRDMSRRHERLAGLARQLQAVSPLAVLGRGYAILQDDSGRVIRRAA
DTEPGQALTARLGEGRLKVEVKRRLK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcccaccgctagcgcgctctccgtcagcgaagtgaaccgccgcgcccggctg
ctgctcgaacagggcatcggcgaggtatgggtcgagggcgagctctccggcgtctcgcgg
ccggcctcggggcacgtctacttcaccctcaaggacagctcggcgcagctgcgcggggcg
ctgttccgcaaccgtgcgcgcttcgtcgccgcgcccatgcgcgacggcgaccgggtgcgg
gtgcgcgggcgggtgtcgctgttcgagccacgcggcgactaccagttgattgccgaagcg
gtgcagccggccggcgagggcgagctgctgctcgcgctggaacggctcaagcagcgtctc
gccgccgagggcgtcttcgccaatgcgcgccccctgccctgcccgccccgccacctgctg
gtgctcacctcgcccaccggcgccgccatccgcgacgtgctggcggtgctcgccgcgcgc
tggccgctggcccacgtgacgctgatcgcggtgcccgtgcagggtcgcgaggcggcccca
gcgctgatcgccgcgctggggctgctcaaccgccagcaggcgctcgacccggcccgcgac
gtgatcctgatcacccgcggcggcggcagcctggaggacctgtgggccttcaacgacgaa
cacctggcgcgggcgatcttccattcgcgcctgccggtgatgtcggcggtgggccacgag
gtcgacgtcaccctgtcggatctggccgccgacgtgcgcgccccgacgccttccgccgcc
gccgagatgctggtgccggatgggcgcgacctgcggcaacgcctggccgggctggagcgc
cagctctggcgctgcacccaggcgcggctcgaacgcgagggccagcggctcgaccacctg
cgcgcgcggctgcgccacccgggcgaggtagtcgcccgccagcgccagaccctgggcgag
ctggaggcccgcctgcggcgcgccatgcacatgcggctcgccgccgaccgccgccagttg
gaccacctgcagcggcgcacgagcgcctgccacccgcggcgcggggtcgaacgagccggg
gaacggctggcccgtgcccgcgcccggctggcgcaggccatgcagcgcgacatgtcacgc
cggcacgaacgcctggccggcctggcgcggcagcttcaggcggtgagcccgctggcggtg
ctggggcgcggctacgccatcctgcaggacgattcaggcagggtgatacggcgcgcggcc
gataccgagcccggccaggcgctgacggcgcggctgggcgaaggccggttgaaggtggag
gtcaagcgccggctcaaatga
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