Halomonas sp. SS10-MC5: I4484_04355
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Entry
I4484_04355 CDS
T07024
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I4484_04355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_04355
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I4484_04355
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
QPP50358
UniProt:
A0A7T2DBX9
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All DBs
Position
complement(924800..926002)
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AA seq
400 aa
AA seq
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MPSPKSKTKPTPKDKRRTKEKDESAQGEENKRFHASGPRPLWSGTITFGLVSLPVNLYPA
NRPKPVSLRMVDRDGTPLARRYFCEKEERVLDYDELIRGYEVEKNEFVVVEDRELDSLAP
EKSQEIDLKRFVGLDEIDPMYFERAYFMTPDKGVTKAYRLLAQSMEATGRAGIATFVMRG
KEYLVAIIAEKGILRAETLRFAEELRTPDDIDLPEPSKVDKSRVKAMQQAIEALSEEDLE
REALQDRQSQRIVARAEEKLERGEDVIALGEEDAPDVEPEQGGEVIDLMQVLKQSLAEGR
PPGQDRREDTGKGQPDGRGKPAAKRSETKKRPSGQRGAGKRAAGESDGKAAPRGKRRPAE
LAELENLSRDELYERAQQLDVPGRSRMSKAELAKAIASAG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgcctagcccgaaatcgaaaaccaagcccacgccgaaggacaagcgccgcacgaaggaa
aaggacgaatcggcccagggcgaggagaacaaacgcttccacgccagcggcccgcgcccg
ctgtggtcgggcaccatcaccttcggtctggtcagcctgccggtcaacctctacccggcc
aaccgccccaagccggtgtcgctgcgcatggtcgaccgcgacggcacaccgctggcgcgg
cgctacttctgcgagaaggaggagcgcgtgctcgactacgacgagctgatccgcggctac
gaggtcgagaagaacgaattcgtggtggtggaggatcgcgagctcgattcgctggcgccg
gagaagtcccaggagatcgatctcaagcgcttcgtcggcctcgacgagatcgacccgatg
tacttcgaacgcgcctatttcatgacccccgacaagggcgtgaccaaggcctaccgtctg
ctggcgcaaagcatggaggccaccgggcgcgccggtatcgccaccttcgtcatgcgcggc
aaggagtatctggtggcgatcattgccgagaaaggcatcctgcgcgccgagacgctgcgc
ttcgccgaagagctgcgcaccccggacgacatcgacctgcccgagccttccaaggtcgac
aagagcagagtgaaggcgatgcaacaggccatcgaggcgctgagcgaggaggatctcgaa
cgcgaagcgctacaggaccggcagagccagcgcatcgtcgcgcgtgccgaagagaagctc
gagcgcggcgaggacgtgatcgccctgggcgaggaggacgcgcccgatgtcgagccggaa
cagggcggcgaagtgatcgacctgatgcaggtgctcaagcagagcctcgccgaagggcgc
ccgcccggccaggataggcgcgaagacaccggcaagggccagccggatgggcgcggcaag
ccggcggccaagcgcagcgagaccaagaagcgcccctcaggccagcgcggcgcgggcaag
agggccgccggagagagcgacggcaaggcggcaccacgcggcaagcgtcggcccgccgag
ctggccgagttggaaaacctctcccgcgacgagctctacgagcgcgcccagcagctcgac
gtgcccggccgcagccgcatgagcaaggccgagctggccaaggccatcgccagcgcaggc
tga
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