KEGG   Halomonas sp. SS10-MC5: I4484_04355
Entry
I4484_04355       CDS       T07024                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
hcam  Halomonas sp. SS10-MC5
Pathway
hcam03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hcam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    I4484_04355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcam03400]
    I4484_04355
DNA repair and recombination proteins [BR:hcam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     I4484_04355
SSDB
Motif
Pfam: Ku Rho_N
Other DBs
NCBI-ProteinID: QPP50358
UniProt: A0A7T2DBX9
LinkDB
Position
complement(924800..926002)
AA seq 400 aa
MPSPKSKTKPTPKDKRRTKEKDESAQGEENKRFHASGPRPLWSGTITFGLVSLPVNLYPA
NRPKPVSLRMVDRDGTPLARRYFCEKEERVLDYDELIRGYEVEKNEFVVVEDRELDSLAP
EKSQEIDLKRFVGLDEIDPMYFERAYFMTPDKGVTKAYRLLAQSMEATGRAGIATFVMRG
KEYLVAIIAEKGILRAETLRFAEELRTPDDIDLPEPSKVDKSRVKAMQQAIEALSEEDLE
REALQDRQSQRIVARAEEKLERGEDVIALGEEDAPDVEPEQGGEVIDLMQVLKQSLAEGR
PPGQDRREDTGKGQPDGRGKPAAKRSETKKRPSGQRGAGKRAAGESDGKAAPRGKRRPAE
LAELENLSRDELYERAQQLDVPGRSRMSKAELAKAIASAG
NT seq 1203 nt   +upstreamnt  +downstreamnt
gtgcctagcccgaaatcgaaaaccaagcccacgccgaaggacaagcgccgcacgaaggaa
aaggacgaatcggcccagggcgaggagaacaaacgcttccacgccagcggcccgcgcccg
ctgtggtcgggcaccatcaccttcggtctggtcagcctgccggtcaacctctacccggcc
aaccgccccaagccggtgtcgctgcgcatggtcgaccgcgacggcacaccgctggcgcgg
cgctacttctgcgagaaggaggagcgcgtgctcgactacgacgagctgatccgcggctac
gaggtcgagaagaacgaattcgtggtggtggaggatcgcgagctcgattcgctggcgccg
gagaagtcccaggagatcgatctcaagcgcttcgtcggcctcgacgagatcgacccgatg
tacttcgaacgcgcctatttcatgacccccgacaagggcgtgaccaaggcctaccgtctg
ctggcgcaaagcatggaggccaccgggcgcgccggtatcgccaccttcgtcatgcgcggc
aaggagtatctggtggcgatcattgccgagaaaggcatcctgcgcgccgagacgctgcgc
ttcgccgaagagctgcgcaccccggacgacatcgacctgcccgagccttccaaggtcgac
aagagcagagtgaaggcgatgcaacaggccatcgaggcgctgagcgaggaggatctcgaa
cgcgaagcgctacaggaccggcagagccagcgcatcgtcgcgcgtgccgaagagaagctc
gagcgcggcgaggacgtgatcgccctgggcgaggaggacgcgcccgatgtcgagccggaa
cagggcggcgaagtgatcgacctgatgcaggtgctcaagcagagcctcgccgaagggcgc
ccgcccggccaggataggcgcgaagacaccggcaagggccagccggatgggcgcggcaag
ccggcggccaagcgcagcgagaccaagaagcgcccctcaggccagcgcggcgcgggcaag
agggccgccggagagagcgacggcaaggcggcaccacgcggcaagcgtcggcccgccgag
ctggccgagttggaaaacctctcccgcgacgagctctacgagcgcgcccagcagctcgac
gtgcccggccgcagccgcatgagcaaggccgagctggccaaggccatcgccagcgcaggc
tga

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