KEGG   Halomonas sp. SS10-MC5: I4484_05020
Entry
I4484_05020       CDS       T07024                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hcam  Halomonas sp. SS10-MC5
Pathway
hcam03030  DNA replication
hcam03430  Mismatch repair
hcam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hcam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I4484_05020
   03430 Mismatch repair
    I4484_05020
   03440 Homologous recombination
    I4484_05020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcam03032]
    I4484_05020
   03400 DNA repair and recombination proteins [BR:hcam03400]
    I4484_05020
Enzymes [BR:hcam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I4484_05020
DNA replication proteins [BR:hcam03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I4484_05020
DNA repair and recombination proteins [BR:hcam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I4484_05020
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QPP50473
LinkDB
Position
1055296..1056021
AA seq 241 aa
MLSHRLTARSQGHEWPSYLQRRAAEARAPVLKAFFAADWPAPETPIGEAPLVALDLETTG
LDVQRHAIVSIGLVPFSLQRIPLAERRYWVVRPSRPLSGASVAYHHITHSEVAGAPDLES
ILPELLEALAGRVVVVHFRHIERPFLDEAVKARLGEGIRFPMIDTMSLEARLHRLSLWSR
LRRWMRRPPVSIRLGDSRRRYGLPDYQGHHAMVDALATAELLQAQVARHYDPALPVSALW
T
NT seq 726 nt   +upstreamnt  +downstreamnt
atgctgtctcatcgcttgaccgcgcgttcgcaagggcatgagtggccctcttacctgcag
cgtcgggcggccgaagcccgagcgccggtgctgaaggcgttcttcgcggcggactggccg
gcgcccgaaacgcccatcggcgaggcaccgctggtggccctggacctggagaccaccggc
ctcgacgtgcagcgccatgccatcgtcagcatcggcctggtgcccttcagcctgcagcga
atccccctggccgagcgccgctactgggtcgtgcgccccagccgtccgctgtccggggcc
tcggtcgcctatcatcacatcacccactcggaagtggccggggcgcccgacctggaatcg
atcctgcccgagctgctcgaggcattggcggggcgggtcgtcgtggtgcacttccgccac
atcgagcggccctttctcgacgaggcggtcaaggcgcggctgggagaggggatccgcttt
ccgatgatcgacaccatgtcgctggaagcgcggctccaccggctttcgctgtggtcgcgc
ctgcggcgctggatgcggcgtccgcccgtgtcgatacgcctgggcgacagccggcggcgc
tacgggctgcccgactaccaggggcatcacgccatggtcgatgcgctggcgacggcggaa
ctgctccaggcccaggtggcgcggcactacgaccccgcgctgcccgtcagcgcgctatgg
acctag

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