Halomonas sp. SS10-MC5: I4484_05525
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Entry
I4484_05525 CDS
T07024
Name
(GenBank) response regulator transcription factor
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam02020
Two-component system
hcam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I4484_05525
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I4484_05525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hcam02022
]
I4484_05525
Two-component system [BR:
hcam02022
]
OmpR family
QseC-QseB (quorum sensing)
I4484_05525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
GlnR_1st
TP_0454_N
Motif
Other DBs
NCBI-ProteinID:
QPP50561
LinkDB
All DBs
Position
complement(1162275..1162946)
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AA seq
223 aa
AA seq
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MRILLVEDDPSLASGIRLALKPEHYTVDHLADGTAALNALHGDEPFDAVILDLGLPGLDG
MRVLESTRRRGNRVPVLVLTARDAVDDRIAGLDAGADDYLIKPFEVAELKARLRALLRRS
QGQASPMLECRDIRLDPATLGVSYRGRPVVLSRREFTLLHEFMSHPGRVFTRDTLTRLVY
GWEADVESNAIEVHVHHLRRKLFPDLIRTVRGIGYVLDEADAP
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgctggtggaggatgacccgagcctggcctcgggcatccgcctggctctc
aagcccgagcactacaccgtcgatcatctggccgacggtaccgcggccctgaacgcgctg
cacggcgacgaaccgttcgatgccgtgattctcgacctgggcctgcccgggctggacggt
atgcgggtactggagagcactcgccgacggggcaaccgggtgccagtgctggtgctcacc
gcccgggatgccgtcgacgaccgcatcgccggcctggacgccggcgctgacgattatctg
atcaagcccttcgaggtagccgagctcaaggcgcgcctgcgcgcgctgctgcgccgcagc
cagggccaggcgagccccatgctggagtgtcgcgacatccgcctcgatccggccaccctc
ggtgtcagctaccgcggccggccggtggtgctgtcgcgtcgcgagttcaccctgctgcac
gagttcatgagccacccggggcgcgtcttcacccgcgataccctgacccggctggtctac
ggctgggaagcggacgtcgagagcaatgccatcgaggttcatgtccaccacctgcgccgt
aagctgttcccggacctgatccgcacggtgcgggggatcggctacgtgctggatgaggcc
gacgccccatga
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