Halomonas sp. SS10-MC5: I4484_05960
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Entry
I4484_05960 CDS
T07024
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcam03000
]
I4484_05960
Transcription factors [BR:
hcam03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I4484_05960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QPP50639
UniProt:
A0A7T1Y5Z2
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Position
complement(1253689..1254588)
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AA seq
299 aa
AA seq
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MNPSIKQLRAFVAVAQSSSLAEASERIHLSQPAISIALRKLEETVGGALFSRATRQLSLT
PEGEAFLPVAVRLLHDWSEAFEDLGERFSKQRGKITVAALPTLAAGLLPGIIATFHARYP
RINLSLHDVLAEQVSQLVREGRADLGLSVAPHDTEELAFEPVLVDRYVAVCPSGHPLLEQ
ASVHWRQLAGHPFIGISRLSSSRQDIDRIMAEVGAPLSILCDASQIATVGRMVAAGLGIS
VLPRLSFRQIATDGIDYRPLTTPDVERPLGIVIRHRHPLSAAAAALRAMIQESPLDPAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcatcaagcagctgcgcgccttcgtcgccgtggcccagtcgagcagcctc
gccgaagccagcgagcgtatccatctctcccagccggcgatctccatcgccctgcgcaag
ctcgaggagacggtgggcggcgcgctattttcgcgcgccacacgccagctcagcctgacc
cccgagggcgaggccttcctgccggtggcggtacgcctgctgcatgactggtccgaggcc
ttcgaggatctcggcgagcgcttctccaagcagcgcggcaagatcaccgtggccgccctg
cccaccctggcggcggggctgctgccaggcatcatcgccacctttcacgcccgctacccg
cgcatcaacctgagcctgcacgacgtgctggccgagcaggtcagccagctggtgcgcgag
gggcgcgccgacctggggttgtcggtggccccccacgacaccgaggagctcgccttcgag
ccggtgctggtggatcgctacgtggcggtctgccccagcggtcatccgctgctcgagcaa
gcgagcgtgcactggcggcagctggccggacaccccttcatcggcatcagtcgcctctcc
agctcgcgccaggacatcgaccgcatcatggccgaggtgggcgcgccgctttcgatcctg
tgcgacgccagccagatcgccaccgtgggccgcatggtcgccgccgggctcggcatcagc
gtgctgccgcgactgagctttcgccagatcgccaccgacggcatcgactaccgaccgctg
acgacacccgacgtcgagcgcccgctgggcatcgtcattcgccatcgccacccgctctcg
gccgccgccgcggcgctgcgcgcaatgattcaggagtcgcccctggatccagccggctag
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