Halomonas sp. SS10-MC5: I4484_07115
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Entry
I4484_07115 CDS
T07024
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcam03016
]
I4484_07115
Enzymes [BR:
hcam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
I4484_07115
Transfer RNA biogenesis [BR:
hcam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I4484_07115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QPP51545
UniProt:
A0A7T2DD19
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All DBs
Position
complement(1495027..1496967)
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AA seq
646 aa
AA seq
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MLQNNPLLAQLKQQIRETTPRAEGVIKATEKGFGFLETDDGQSYFVPPPAMKQVLHGDRV
QAVIHENGDKTSVEPDTLIEAGLSRFIARVQKREGRLAVVPDHPSIKNALKARIKNSLDE
ASIGDGDWVVARLVRHPLKPDDRAFFTQIDELVAKADDPAVPWRVTLARHALEQECPDAG
DDWPLRDEGLERQDLTAEPFFTIDSEKTRDMDDALRIEPREGGGWRLTVAIADPTAYVEE
GHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLREGEERPVLACTLDVEADGSLGDY
RFFAATLRSRAKLVYDRVSDWLEGQGEWTPAEEIAGQLRALRDMTEARAAWRAEHALVFK
DRPDYVFDLDPAGNVLDIRIEERRIANRMIEESMIAANACCAHLLAEHVGHGIFNVHRAF
DPEKAQAAHEFLTAQQIEVELEALSELPRYKELKRALESRDDAWLDARLRRFQGFTSMSA
RPGPHFGLGLAAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEATQALTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAEAQQAFDAEIFGISRGGMRVRLVANGATAFVPAPMLHSDR
DKIAIDDKEGRILIEGEERYKLGDRIRVELVEAREETRSLVARPSA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaacaacccgctgctcgcccagctcaagcaacagattcgtgagaccacgccc
cgcgccgagggggtaatcaaggccacggaaaagggtttcgggtttctcgaaaccgacgac
ggtcagtcctacttcgtgccgcccccggccatgaaacaggtgctgcatggcgatcgtgtc
caggccgtgatccacgagaacggtgacaagacctccgtcgaacccgatacgctgatcgag
gcaggcctcagccgcttcatcgcccgggtgcagaaacgcgaggggcgcctggcggtggtg
cccgaccacccctcgatcaagaacgcactcaaggcgcgcatcaagaacagtctcgacgag
gcgagcatcggcgatggcgactgggtcgtggcacgcctggtgcgtcacccgctgaagccc
gacgaccgtgccttcttcactcaaatcgacgagctggtggccaaggccgacgaccccgcc
gtgccgtggcgcgtgacgctggcccgccacgccctggaacaggagtgccccgacgccggc
gacgactggccgctgcgcgacgaagggctcgaacgccaggacctcaccgcggaaccgttc
ttcaccatcgacagcgagaagacccgcgacatggacgatgccctgcgcatcgagccacgc
gagggcggcggctggcgcctgacggtcgccatcgccgaccccaccgcctacgtcgaggag
ggccatgccgccgatctggaggcgcgcacccgcgctttcaccgtctacctgccgggacag
aacgtcaccatgctgcccgagcagcttgccgacgacctgtgctcgctgcgcgagggcgag
gagcgtccggtgctggcctgtaccctggacgtcgaagccgacggcagcctgggcgactac
cgctttttcgcggccaccctgcgctcccgggccaagctggtctacgaccgcgtctccgac
tggctcgagggccagggcgaatggaccccggccgaggagatcgccggtcagctacgcgcg
ctgcgagacatgaccgaggctcgcgctgcctggcgcgccgagcatgcgctggtgttcaag
gaccgccccgactacgtcttcgacctcgacccggcgggcaacgtgctggatatccgcatc
gaggagcggcgcatcgccaaccgcatgatcgaggagtcgatgatcgcggccaacgcctgc
tgcgcccacctgctcgccgagcacgtcggccacggcatcttcaacgtgcaccgcgccttc
gatcccgaaaaggcccaggccgcccacgagttcctcaccgcccagcagatcgaggtcgaa
ctcgaggcgctttcggagctgccgcgctacaaggagctcaagcgcgcgctggagagccgc
gacgacgcctggctcgacgcccgcctgcgccgattccagggttttaccagcatgtccgcc
cggcccggcccgcacttcggcctgggcctggccgcctacgccacctggacctcgccgatc
cgcaagtacggcgacatggtcaaccaccgcctgatcaagcgcgtgctcaagggcgagcag
gccccggcggaggcgacccaggccctgaccgagcagctcaccgagcggcgccggctcaac
cgcatggccgagcgcgacgtcaaggactggctctacgtgcgctatctgacgccggcggcc
gaagcgcagcaggccttcgacgcggagatcttcggcatcagccgcggcggcatgcgcgtg
cgcctcgtcgccaacggcgccaccgccttcgtgccggcgccgatgctgcacagcgaccgt
gacaagatcgccatcgacgacaaggagggccgcatcctgatcgagggcgaggagcgctac
aagctcggcgaccgcattcgcgtcgagctggtcgaggcgcgcgaggagacccgttcgctg
gtggcacgccccagcgcgtga
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