Halomonas sp. SS10-MC5: I4484_07905
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Entry
I4484_07905 CDS
T07024
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03030
DNA replication
hcam03430
Mismatch repair
hcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I4484_07905 (dnaX)
03430 Mismatch repair
I4484_07905 (dnaX)
03440 Homologous recombination
I4484_07905 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcam03032
]
I4484_07905 (dnaX)
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_07905 (dnaX)
Enzymes [BR:
hcam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I4484_07905 (dnaX)
DNA replication proteins [BR:
hcam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I4484_07905 (dnaX)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I4484_07905 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
AAA_2
AAA_19
AAA_30
Mg_chelatase
nSTAND3
TsaE
AAA_28
AAA_24
Rad17
Herpes_Helicase
NTPase_1
DUF815
Motif
Other DBs
NCBI-ProteinID:
QPP50990
UniProt:
A0A7T2DCI6
LinkDB
All DBs
Position
1668669..1670666
Genome browser
AA seq
665 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQEHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTAKGHGDDGITSTPCGQCDSCRAIDEGRFVDLLEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFT
LKNMPPERIVGHLAKVLEAEGIGFEESALWLLGRAADGSMRDAMSLTDQAIAFGQGQVRH
ADVAAMLGTLDHRHVLALVEALADVDAPRLLAEIGQLAEQGPDFAAVLDDMTAVLHRLAV
AQMVPDAVDNGHGDRETVLALASRFTAEDVQLYYQIGIQGRGDMTHAPDLRTALEMTLLR
MLAFRPQGVPQPAKTPLPLRGAGSGGTPAAPAGGEGEPPAEARGEGGTPTAASRQPEPTS
APSPPLADAEAERAPEPPPPWEEPALPVPDEPVEAPAAPAPSAPVVSRAATPVAEPDARE
QASTPPPAAAQDTVSRMEEGDTAVLEASNPGLEPPDPVAATPPPSAAAPGERFDHDRWLQ
DFESLGLGGLTRNLAAHCVVEADDGRRLTLRLDPSQEAMNAEIHVRRVQEALAGIGIARQ
LVIEPGALPTQVETPRQRADRIAAERHAEAVAALQRDPHVRQLQDTFGARLIETTVKPAE
TAPRA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaagtggcggccgcgtacgttccatgaactggtcggc
caggagcacgtccagcgtgcgctggtgaacgccctcgaccaagggcgtttgcaccacgcc
tacctgttcaccggcacgcgaggcgtcggcaagacgactctggcaagaatactcgccaag
tgcctcaactgtaccgccaaggggcacggcgacgacgggatcacctccacgccctgcggc
cagtgcgacagctgccgagccatcgacgaaggccgcttcgtcgatcttctcgaggtcgac
gccgcctcgcgcaccaaggtggaggacacccgcgagctgctcgacaacgtgcagtacgcc
cccacccaggggcgctacaaggtgtacctcatcgacgaggtgcacatgctctccaccagc
agcttcaatgccttgctcaagacgctggaagagccgccgccccacgtcaagttcctgctc
gccaccaccgacccccagaagctgccggccacggtgctgtcgcgctgcctgcagttcacg
ctcaagaacatgccgccggagcgcatcgtcggccacctggccaaggtgctcgaagccgag
ggcatcggtttcgaagagagcgccctgtggctgctgggacgtgccgccgacggctccatg
cgcgatgccatgagcctgaccgaccaggcgattgccttcggccaggggcaggtccgccat
gccgatgtcgccgccatgctcggcaccctggaccaccgccatgtgctggcgctggtcgag
gccctggccgacgtcgacgccccccggctgctggccgagattggccaactggccgagcag
gggccggatttcgccgcggtgctcgacgacatgaccgccgtgctgcaccgcctggccgtg
gcgcagatggtgccggatgcagtggacaacggccacggcgatcgcgagacggtgctggcc
ctggcctcgcgcttcactgccgaggacgtgcagctctactaccagatcggcatccagggg
cgtggcgacatgacccacgcgcccgacctgcgcacggcgctggagatgaccctgttgcgc
atgctggccttccgcccccagggcgtgccccagccggcgaagacaccgctgccgctgcgt
ggcgcgggcagtggcggcacgcccgccgcacccgcgggcggggagggcgagccgccggcc
gaggcccgcggggagggggggacgcccaccgccgcgtcgcgtcagcccgagccgacgtcg
gcgccgagccccccgctggcggacgccgaggccgagcgggcgcccgaaccgccgccgccc
tgggaggagcccgccctgccggtgccggacgagcccgtcgaggcacccgccgcgcccgcg
ccgagcgcccccgtcgtctcccgcgcggcaacgcctgtcgcggagccggacgccagggag
caggcgtctacgccccctcccgccgccgctcaggacacggtgtcacgcatggaagagggc
gataccgccgtcctcgaggcgtcgaatcccggcctcgaaccccccgacccggtcgccgca
acgccgccaccgtcggctgccgcccccggggagcggttcgaccatgaccgctggctgcag
gacttcgaatctctcgggctgggtgggctgacacgcaacctcgccgcccactgcgtggtc
gaagccgatgacggccgccggctgacgctgcgcctggacccgtcgcaagaggccatgaac
gccgagatccacgtgcgtcgcgtgcaggaggcgctggcgggcatcggcattgcgcggcag
ctcgtcatcgagcccggggccttgcccacccaggtggaaacgccccggcagcgcgccgat
cggatcgccgccgaacgccacgccgaggccgtggcggccctgcagcgcgacccgcatgtc
aggcaactccaggacactttcggtgcacgcctgatcgaaacgaccgtcaagccggcggaa
acggcaccaagggcctga
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