Halomonas sp. SS10-MC5: I4484_09230
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Entry
I4484_09230 CDS
T07024
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcam03000
]
I4484_09230
Transcription factors [BR:
hcam03000
]
Prokaryotic type
Helix-turn-helix
Other families
I4484_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
HTH_23
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_50
HTH_29
MCM
AAA
HTH_24
HTH_1
Mg_chelatase
HTH_28
Zeta_toxin
AAA_16
IclR_C
HTH_22
AAA_22
HTH_7
TrmB
HTH_20
nSTAND6
HTH_11
TetR_N
DUF2635
HTH_IclR
AAA_3
CLIP_SPH_mas
Motif
Other DBs
NCBI-ProteinID:
QPP51576
LinkDB
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Position
complement(1961736..1963739)
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AA seq
667 aa
AA seq
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MSTTPLTTHHQRQHIDTILRTVADTEARTPAQNEAGIIARSWRRCIDRYGLDPARPTPAR
YVPGATLREHQDQADALLQVARAGVEQLYRQVAPLSYVVLLTDARGIAVQFLGAKSDQRE
HQRTGLYLGSDWSESHAGTCAVGTCIHERTALTCHHSDHFSAHHIQLTCTAAPVFDPHGQ
LLAVLDISAYRSPSAKESQTFALQLVKTTARMIEDAYFLQRYGDRHIVCLDRSREFVQIN
RRYLLAMEEDGTLVAANTAGRKLLRHHGLPLPEAGEARPFQAWNIRDLLDGEVSEVLAIP
QHSDDRVQAFHTRRHREIHFATLIEPPRRPGANRSLPRDSSLAPLEALAEDDPSMRDTLT
RAARLRNEPINILVMGETGTGKERMARALHDSSRRRDKPFVAINCAAMPESLIESELFGH
EPGSFTGARSKGMKGLIVQADGGTLFLDEIGDMPLQLQTRLLRVLAEQEVLPIGASRPIK
VDLRVVAATHRDLRELIQAGRFREDLFYRLNGASLRLPPLRERADKGYLIRQIFAELNEQ
RGSRVRLRGDAMSALLAYPWPGNIRELHNALHYALATCDGDEVVVGDLPEECVHGQLAHP
GASQGQALSTATGSSARALHQDLLYRALCRHQWNVSAVARELGLSRPTIYRRMKRLGIMP
PNQQPAS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgacaccgctcacgacacaccaccagcgccagcatatcgacacgatattgcgc
accgttgccgacaccgaggcgagaacgccggcgcaaaacgaagccggcatcattgcccgc
tcatggcgtcgctgcatcgatcgctatggcctcgatccggcccgtcccacgcccgcccgc
tacgtgcccggcgccaccttgcgcgaacaccaggaccaggccgatgccctgctccaggtg
gcccgggccggagtcgagcagctctatcgccaggtcgcgccgctgagctacgtggtactg
ctgaccgatgcccgcggcatcgcggtgcagttcctcggcgccaagagcgaccagcgcgag
catcagcgcaccggcctctacctgggatcggactggagcgaatcccatgccgggacctgc
gccgtgggcacctgcatccacgagcgcaccgccctgacctgccatcacagcgaccacttc
agtgcccaccacatccagctcacctgcaccgcggcaccggtcttcgatccccacggccag
ctgctggcggtactcgacatctccgcctatcgctcgccctccgccaaggagtcgcagacc
ttcgccctgcagttggtcaagaccaccgccaggatgatcgaggatgcctacttcctgcag
cgctatggcgaccgccatatcgtctgcctggatcgctcgcgggagttcgtgcagatcaat
cgccgctacctgctggccatggaggaggacggcaccctggtggccgccaacacggcgggg
cgcaagctgctgcgccatcacggcctgccgctgcccgaggccggcgaggcacgccccttc
caggcctggaacattcgcgacctgctcgacggcgaagtcagcgaggtactcgccatcccc
cagcacagcgatgaccgggtacaagcctttcacacccggcgccaccgcgagatccacttc
gccaccctgatcgagccgccccggcgccccggcgccaatcgctcgctgccccgcgactcc
agcctggccccgctcgaggcgctggccgaggacgacccgagcatgcgcgacaccctgacc
cgggccgcgcgcctgcgcaacgagccgatcaacatcctggtgatgggcgagaccggtacc
ggcaaggagcgcatggcccgcgccctgcacgactcgagccggcgccgcgacaagccattc
gtggcgatcaactgcgccgccatgccggagtcgctgatcgagagcgagctgttcggccac
gaaccgggcagcttcaccggggcgcgcagcaagggaatgaaggggctgatcgtgcaggcc
gacggcggcacgctgttcctcgacgagatcggcgacatgccgctgcagctgcagacccgt
ctgttgcgggtgctggccgagcaggaggtattgcccatcggcgccagccggccgatcaag
gtggacctgagggtagtggccgccacccaccgcgacctgcgcgagctgatccaggccggg
cgcttccgcgaggacctcttctatcgtctcaacggcgccagcctgcgactgccgccgctg
cgcgaacgcgccgacaagggctacctgatccggcagatcttcgccgagctgaacgagcag
cgcggttcgcgggtgcgcctgcgcggcgacgccatgagcgccctgctcgcctatccctgg
cccggcaacattcgcgagctgcacaacgcgctgcactacgcgctggccacctgcgatggg
gacgaggtcgtcgtcggcgacctgcccgaggagtgcgtgcatggtcagttggcccacccc
ggtgccagccagggccaggccctgtccaccgccaccggttcatccgcgcgagcgctccat
caggacctgctctaccgcgccctgtgccgacaccaatggaacgtcagcgccgtggccagg
gaactggggctgtcgcgcccgaccatctaccgccgcatgaagcggctgggcatcatgccg
ccgaaccagcagcccgccagctga
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