Halomonas sp. SS10-MC5: I4484_11155
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Entry
I4484_11155 CDS
T07024
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I4484_11155 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_11155 (uvrB)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I4484_11155 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I4484_11155 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QPP47835
LinkDB
All DBs
Position
complement(2372219..2374240)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFRLNANFKPAGDQPTAIEGLIHGLESGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAIEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRRFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIYPADSDEEAVRVELFDDEIDSIRLFDPLTGEVRGQVPR
MTIYPKSHYVTPRETIISAADAIKAELVERLAWLRKNDRLVEAQRLEQRTLYDLEMMNEL
GYCNGIENYSRYLSGRNPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMTFEEWERICPQTIFVSATPGPYEAEHAGQVVEQVVRPTGLVDP
EIEVRPASTQVDDLLSEIRARAEVGERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAILYADRVTDSMRRAIDETERRRAKQIAHNEKHGITPTTVTRSVADIMEAAQ
APGRKGKGRRGERKVAEGAAIYDISELSPTDLVKEVSRVEDAMFEAAQNLEFEEAARLRD
RLHELKERQLALG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgtttcgcctcaatgccaacttcaagcccgccggcgatcagcctaccgcc
atcgagggcctgatccacgggctcgagtccgggttggcccaccagacgctgctcggcgtg
accgggtcgggcaagaccttcaccatggccaacgtggtcgagcggctgcagcggccgacc
atcgtcatggcgcccaacaagaccctggccgcccagctctacggcgagttcaagtcgttc
tttcccgacaacgccatcgagtacttcgtctcctactacgactactaccagccggaagcc
tacgttccctcgtcggataccttcatcgagaaggatgcctcgatcaacgaccacatcgag
cagatgcggctctcggcgacgaaagcgctgttggaaaggcgcgatgcgctgatcgtggtg
tcggtctcggcgatctacggtctcggcgaccccgaccagtacctcaagatgcgcctgcac
ttcacccgcggcgagctgatcgatcagcgccgcttcctgcgccgcctggcggagctgcag
tacacccgcaacgacatggacttcaagcgtggtacctaccgggtgcgcggcgacgtgatc
gacatctacccggccgattccgacgaggaagcggttcgggtcgagctgttcgacgacgag
atcgactcgatccggctgttcgacccgcttaccggcgaggtgcgcggccaggtaccgcgc
atgaccatctaccccaagagccactacgtgacgccgcgggagaccatcatctcggctgcc
gatgcgatcaaggccgagctggtcgaacgccttgcgtggctgcgcaagaacgatcgcctg
gtcgaggcccagcggctggagcagcgtactctctacgatctcgagatgatgaacgagctg
ggctactgcaacggcatcgagaactactcgcgctatctttcgggccgcaaccccggcgag
ccgccgcccaccttcttcgactacctgcccgacgatgcgctgctgttcatcgacgagtcc
cacgtcagcgttccccaggtcggcggcatgtacaagggcgaccgctcgcgcaaggagacg
ctggtcgagtacggcttccgcctgccctcggcgctggacaaccgccccatgaccttcgag
gagtgggagcgcatctgcccgcagacgatcttcgtctcggccaccccggggccctacgag
gccgagcacgctggccaagtggttgagcaggtggtgcgccccaccgggctggtcgatccc
gagatcgaggtgcgtccggcctcgacccaggtcgacgacctgctctccgagatccgtgcc
cgcgccgaagtgggcgagcgggtgctggtcaccaccctgaccaagcgcatggcggaggac
ctcaccgagtacctcgacgaacatgacgtgagggtgcgctacctgcactcggacatcgac
acggtggagcgggtggagatcatccgcgacctgcgcctgggcaagttcgatgtgctggtg
ggcatcaacctgctgcgcgagggcctcgacatccccgaggtctcgctggtggcgatcctc
gatgccgacaaggagggcttcctgcgcaacgagcgctcgctgatccagaccatcggccgg
gcggcgcgcaacgcccacggcaaggcgatcctctacgccgaccgggtgaccgactccatg
cgccgcgccatcgacgagaccgagcggcgccgcgccaagcagatcgcccacaacgagaag
cacggcatcacgcccaccaccgtgacccgctcggtggccgacatcatggaggcggcccag
gccccgggtcgcaagggcaaggggcgccgcggcgagcgcaaggtggccgagggtgcggcg
atctacgatatctccgagctctcgccgacggacctggtcaaggaggtctcgcgggtcgag
gacgccatgttcgaggcggcccagaacctggagttcgaggaggccgcacggctgcgcgac
cggctgcatgagctcaaggagcggcaactggcgcttgggtaa
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integrated database retrieval system
