Halomonas sp. SS10-MC5: I4484_12035
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Entry
I4484_12035 CDS
T07024
Name
(GenBank) retention module-containing protein
Organism
hcam
Halomonas sp. SS10-MC5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
CshA_repeat
HemolysinCabind
VWA
Big_6
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
QPP47986
LinkDB
All DBs
Position
complement(2567446..2574789)
Genome browser
AA seq
2447 aa
AA seq
DB search
MAISTVISITGQAWARDAEGNLRELRVGDTLQEGEVLITSDNGSVQLDFADGIDPVLVEG
GEQVVMTAELDAAEATDASEFSALDEDLEALLTALDDDSVDLLEVLDATAAGAGPGGGAD
GGHSFVRLARIAENVDPLTFNFGMNDLRGSPEEDGLAFALAEPDENAPDDSEPTITIMSD
SSSVDEAGLPTGSVGDGSHTTSGTFAIDTGNDGLQSLVINGENVTGGGTVNGTHGTLVVT
LANGSYSWTYTLDGATDGDTTSDSFTLVVTDSDGDEASDSLTIAIVDDVPQAVDDTAGTA
EDTPITYNVMDNDTAGADGATLTAASLRNPSQGSLSFDANGAVTFTPAAGFEGDAVIDYT
ITDADGDTSSATLTVTVADDSEPTTEVGGPDVNDGQASVDEAGLPSGSANDGSHVTSGTL
AIDTGNDGLQSLVINGENVTGGGTVNGTHGTLVVTLVDGNYSWTYTLDGATDGDTTSDSF
TLVVTDSDGDEASDSLTIAIIDDVPQAVDDAATQETENAPVTINVFGNDTGGADGIDLTN
GVALVAGSLTGSGTLVYNEDGTFTYTPTAGEEGVVSFEYTITDADGDESTATVTLTLQDD
SEPTIKVSGPDVNDGQASVDEAGLPSGSANDGSHATSGTLAIDTGNDGLQSLVINGENVT
GGGTVNGTHGTLVVTLANGSYSWTYTLDGATDGDTTSDSFTLVVTDSDGDEANDSLTIAI
IDDVPQAVDDTAGTAEDTPITYNVMDNDTAGADGATLTAASLRNPSQGSLSFDANGAVTF
TPAAGFEGDAVIDYTITDADGDTSSATLTVTVADDSEPTIEVGGPDVNDGQASVDEAGLP
SGSANDGSHVTSGTLAIDTGNDGLQSLVINGENVTGGGTVNGTHGTLVVTLANGSYSWTY
TLDGATDGDTTSDSFTLVVTDSDGDEASDSLTIAIIDDVPQAVDDAATQETENAPVTINV
FGNDTGGADGIDLTNGVALVAGSLTGSGTLVYNEDGTFTYTPAAGEEGGVSFEYTITDAD
GDESTATVTLTLQDDSEPTIKVSGPDVNDGQASVDEAGLPSGSANDGSHATSGTLAIDTG
NDGLQSLVINGENVTGGGTVNGTHGTLVVTLANGSYSWTYTLDGATDGDTTSDSFTLVVT
DSDGDEANDSLTIAIIDDVPQAVDDTAGTAEDTPITYNVMDNDTAGADGATLTAASLRNP
SQGSLSFDANGAVTFTPAAGFEGDAVIDYTITDADGDTSSATLTVTVADDSEPTIEVGGP
DVNDGQASVDEAGLPSGSANDGSHATSGTLAIDTGNDGLQSLVINGENVTGGGSVNGTHG
TLVVTLVDGNYSWTYTLDGATDGDTTSDSFTLVVTDSDGDEANDSLTIAIIDDVPQAVDD
AATQETENAPVTINVFGNDTGGADGIDLTNGVALVAGSLTGSGTLVYNEDGTFTYTPAAG
EEGGVSFDYTITDADGDESTATVTLTLQDDSEPTIEVGGPDVNDGQASVDEAGLPGGSAN
DGSHVTSGTLAIDTGNDGLQSLVINGENVTGGGTVQGTHGTLVVTLVNGSYSWTYTLDGA
TDEHSTQGPNIDGVKDSFALVVTDSDGDSANASLTIDIVDDIPSEFTPDAAALVDGAAGK
LNFADAVGADGLGNVVFKASLEGQPAVDTDGNALSFEGQPLFYALSSDGQQLTAMTESGE
EAFVVTLKPNGDGFTIQVNDQVLNGTLVEGNIAAGISGGNSGYYALNSEDGDIANDVLIS
STTNDTINTSSGRLGVSEGQSITNGEFIRFDFLQGLSFTGVSGSPEWEARQQATQFTQDV
YLTGGKNSTASFIVKAVADAEASSGHPSDVTDQYLTLSPDDIVVLDGNGVDVTSEVTLTQ
VGDGIRIDGVKDGWSYRVETEEPFEAIEVTGANGDNFKLGDLSFQTGGTASDFDIELKIE
GQDADGDTVDSSITLSSPAPDALYVGNNSENNHDSTSGSDVLIGDAGGKFTIVEPGQNYN
ISLIVDASGSMNDYSGTGYLSRMDLTKQALVNLANQLKEHDGTVNVQMMVFSYHASTLAS
IQNLNADNVNDLLLAIDAVSAGGGTNYESAFEQAVAWFNAQHGNDASVSDGFKNLTYFLT
DGDPTKYYDADGNLRGPGDATDINTFNASVEAFEELSAVSAVHATGIGSGVSEHILKFFD
NSEVAGEGYLTASNGATTVTAPFGYVDIVNTAEDLDAALKGGSSSDELAELGDDVLTGGD
GDDIIFGDAINSDHLEWTNLDTGEIFSDGSHDGLGYAGLVEYLRWAEGTPGEAPSDAEII
AYVKSRWEELVDTQRADGGNDFLDGGSGDDVLIGGAGDDVLIGGAGDDALIGGAGDDTLL
GGLGADTFAWKLGDQGEEGSAAVDTVEDFSLAQGDSLDLSELLSDGNGLEHLRFEADGSG
TTKLYISTEGNFGTDEGNFDNALADQVIVLENFSGDLEALKSSLNID
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atggccatttccacagttatctcgattaccggccaagcttgggcgcgcgacgccgagggc
aacctgcgcgaattgcgcgtgggcgatacccttcaggaaggtgaggtgctgatcacctcc
gacaacggcagcgtccaactcgacttcgctgatggaatcgatccggtgctggtagaaggc
ggcgagcaagtggtcatgacagcggagctggatgccgccgaagcgaccgacgcttctgaa
ttctctgccttggacgaggatctcgaagccctgctgacggcgctggacgacgacagcgtc
gacctgctggaggtgctcgatgccactgcagctggcgccggccccggtggtggcgccgat
ggcggtcacagcttcgtgcgcctggcgcgcattgccgagaacgtcgacccattgacgttc
aacttcggcatgaatgatctgcgtggctcgccggaagaggacgggctggctttcgccttg
gctgagccggacgagaacgctccagacgactccgagccgaccattacaatcatgtccgac
agcagcagcgtcgacgaggccggcctgccgaccggcagcgtgggtgacggctcgcacacc
accagcggcacttttgctatcgacaccggcaacgacgggctgcagtcgctggtgatcaat
ggtgagaatgtcaccggcggtggcacggtcaacggtacgcacggcaccttggtcgtcacg
ctcgccaacggcagctacagctggacctacaccctcgacggcgccaccgacggtgacacg
accagcgacagcttcaccctggtcgtcaccgacagcgacggcgacgaggccagtgacagc
ctgaccatcgccatcgtcgacgacgtgccgcaggcggtggatgacaccgccgggaccgcg
gaagatacccctatcacttataacgtgatggacaacgatacggccggtgccgatggcgcc
acgctgacggcggcgagcctgcgcaacccgagccagggcagcctgagcttcgatgccaat
ggcgcggtcaccttcaccccggcggcgggcttcgaaggcgatgcggtgatcgactacacc
atcaccgacgccgacggcgatacctccagcgccacgctgaccgtgaccgtggcggacgac
tccgagccgacgaccgaggttggtggccccgacgtcaacgacggccaagccagcgtcgac
gaggccggcctgccgagcggcagtgccaatgacggctcgcacgtcaccagcggcaccctg
gccatcgataccggcaacgacgggctgcagtcgctggtgatcaacggcgagaacgtcacc
ggtggcggcacggtcaacggtacgcacggcaccttggtcgtcacgctcgtcgacggcaac
tacagctggacctacaccctcgacggcgccaccgacggtgacacgaccagcgacagcttc
accctggtcgtcaccgacagcgacggcgacgaggccagcgacagcctgaccatcgccatc
atcgacgacgtgccgcaggcggtggacgacgcggcgactcaggaaaccgaaaacgccccg
gtcactatcaacgtgttcggcaacgacacgggcggtgccgatggcatcgacctgaccaac
ggcgtggccctggtggccggcagcctcaccggcagcggcacgctggtgtacaacgaagac
ggcaccttcacctacaccccgacggcgggtgaggaaggggtggtgagcttcgagtacacc
atcaccgacgccgatggcgacgagagcaccgccacggtcaccctgaccttgcaggacgac
tccgagccgaccatcaaggtcagcggacccgatgtcaacgacggccaagccagcgtcgac
gaggccggcctgccgagtggcagtgccaatgacggctcccacgctaccagcggcaccctg
gccatcgataccggcaacgacggactgcagtcgctggtgatcaacggcgagaacgtcacc
ggtggcggcacggtcaacggtacgcacggcaccttggtcgtcacgctcgccaacggcagc
tacagctggacctacaccctcgacggcgccaccgacggtgacacgaccagcgacagcttc
accctggtcgtcaccgacagcgacggcgacgaggccaacgacagcctgaccatcgccatc
atcgacgacgtgccgcaggcggtggatgacaccgccgggaccgcggaagatacccctatc
acttataacgtgatggacaacgatacggccggtgccgatggcgccacgctgacggcggcg
agcctgcgcaacccgagccagggcagcctgagcttcgatgccaatggcgcggtcaccttc
accccggcggcgggcttcgaaggcgatgcggtgatcgactacaccatcaccgacgccgac
ggcgatacctccagcgccacgctgaccgtgaccgtggcggacgactccgagccgacgatc
gaggttggtggccccgacgtcaacgacggccaagccagcgtcgacgaggccggcctgccg
agcggcagtgccaatgacggctcgcacgtcaccagcggcaccctggccatcgataccggc
aacgacggactgcagtcgctggtgatcaacggcgagaacgtcaccggtggcggcacggtc
aacggtacgcacggcaccttggtcgtcacgctcgccaacggcagctacagctggacctac
accctcgacggcgccaccgacggtgacacgaccagcgacagcttcaccctggtcgtcacc
gacagcgacggcgacgaggccagcgacagcctgaccatcgccatcatcgacgacgtgccg
caggcggtggacgacgcggcgactcaggaaaccgaaaacgccccggtcactatcaacgtg
ttcggcaacgacacgggcggtgccgatggcatcgacctgaccaacggcgtggccctggtg
gccggcagcctcaccggcagcggcacgctggtgtacaacgaagacggcaccttcacttac
accccggcggcgggtgaggaagggggggtgagcttcgagtacaccatcaccgacgccgat
ggcgacgagagcaccgccacggtcaccctgaccttgcaggacgactccgagccgaccatc
aaggtcagcggacccgatgtcaacgacggccaagccagcgtcgacgaggccggcctgccg
agcggcagtgccaatgacggctcccacgctaccagcggcaccctggccatcgataccggc
aacgacgggctgcagtcgctggtgatcaacggcgagaacgtcaccggcggcggcacggtc
aacggtacgcacggcaccttggtcgtcacgctcgccaacggcagctacagctggacctac
accctcgacggcgccaccgacggtgacacgaccagcgacagcttcaccctggtcgtcacc
gacagcgacggcgacgaggccaacgacagcctgaccatcgccatcatcgacgacgtgccg
caggcggtggatgacaccgccgggaccgcggaagatacccctatcacttataacgtgatg
gacaacgatacggccggtgccgatggcgccacgctgacggcggcgagcctgcgcaacccg
agccagggcagcctgagcttcgatgccaatggcgcggtcaccttcaccccggcggcgggc
ttcgaaggcgatgcggtgatcgactacaccatcaccgacgccgacggcgatacctccagc
gccacgctgaccgtgaccgtggcggacgactccgagccgacgatcgaggtcggtggcccc
gacgtcaacgacggccaagccagcgtcgacgaggccggcctgccgagtggcagtgccaat
gacggctcccacgctaccagcggcaccctggccatcgataccggcaacgacgggctgcag
tcgctggtgatcaacggtgagaacgtcaccggcggcggctcggtcaacggtacgcacggc
accttggtcgtcacgctcgtcgacggcaactacagctggacctacaccctcgacggtgcc
accgacggtgacacgaccagcgacagcttcaccctggtcgtcaccgacagcgacggcgac
gaggccaacgacagcctgaccatcgccatcatcgacgacgtgccgcaggcggtggacgac
gcggcgactcaggaaaccgaaaacgccccggtcactatcaacgtgttcggcaacgacacg
ggcggcgccgatggcatcgacctgaccaacggcgtggccctggtggccggcagcctcacc
ggcagcggcacgctggtgtacaacgaagacggcaccttcacctacaccccggcggcgggt
gaggaagggggggtgagcttcgactacaccatcaccgacgccgatggcgacgagagcacc
gccacggtcaccctgaccttgcaggacgactccgagccgacgatcgaggtcggtggcccc
gacgtcaacgacggccaagccagcgtcgacgaggccggcctgccgggcggcagtgccaat
gacggctcgcacgtcaccagcggcaccttggccatcgataccggcaacgacgggctgcag
tcgctggtgatcaacggcgagaacgtcaccggtggtggcacggtgcagggcacgcacggc
accttggtcgtcacgctcgtcaacggcagctacagttggacctacaccctcgacggcgcc
accgacgagcacagtacccaagggcctaacattgatggcgtgaaggatagcttcgcactg
gtggtcaccgacagcgacggtgacagcgccaatgccagcttgaccatcgatatcgtcgac
gacattcccagcgagttcacgccggatgccgcggcgcttgtcgatggtgcggcaggaaag
ctcaacttcgccgatgcggttggggccgatggcttgggcaacgttgtgttcaaggccagc
ctggagggtcagccggccgtcgacacggatggcaatgcactctcgttcgagggccagccg
ctcttctatgcgttgagtagcgatgggcagcaactgacggctatgaccgagagtggcgaa
gaagccttcgtcgtgacgctcaagccgaatggcgacggattcactatccaggtgaatgac
caggttctgaacggcacactggtcgaaggcaacatcgcggcgggcatcagcggcggcaac
tctggctactatgcgctgaactccgaggatggcgatatcgctaatgacgtgctgatctca
tccaccacaaatgacacgatcaataccagctcagggcggttgggtgtcagcgaaggccag
agtattacgaacggtgaattcatccgcttcgatttcctgcaggggctgagtttcacaggc
gtatctggttctcccgaatgggaagctcgccagcaagccacgcagttcactcaggacgtt
tacctgaccggcgggaaaaatagcactgcctcgttcatcgtcaaggcagtggccgatgcc
gaggccagcagtggccacccctcagacgtcacggatcaatatctgacactgtcgccagac
gacatcgtcgttctcgatggcaatggcgtcgacgttacctctgaagtcacattgacccag
gttggggatggcatccgcatcgacggagtgaaggatggctggagctatcgagtcgagact
gaggagccctttgaagccatcgaggtcactggtgccaacggagacaacttcaaacttggt
gacctttcgttccagacgggcggaactgcctctgacttcgatatcgaactgaagatcgaa
ggccaggatgctgatggggataccgtcgacagcagcattacgttgtcttcgccagcccct
gatgcgctctacgtcggcaacaacagcgagaataatcacgacagcaccagtggcagtgat
gtattgataggcgatgcgggaggcaagttcaccatcgtcgagcccggtcagaactacaat
atctcgctgatcgtcgatgcttccggcagcatgaatgactactcgggtactggctacctg
agtcgcatggacttgaccaagcaggcgctggtgaacttggccaatcagctcaaggagcac
gacggcaccgtcaatgtacagatgatggtcttctcctatcacgctagcaccttggccagc
atccagaatcttaacgctgacaacgtaaacgatctcttgctagctattgatgcggtctcg
gctggtgggggaacgaactatgaatcggcgttcgagcaggctgttgcctggttcaatgcc
cagcatggaaacgatgcatcagttagtgatggcttcaagaacctgacctactttctgacc
gacggagatccgacaaagtactatgacgctgacggaaatttgcgtgggccaggtgatgca
actgatataaatactttcaatgcttcggtggaggctttcgaagaactctcggcggtctca
gccgtgcatgccactggtatcggcagtggtgtaagcgagcatatcttgaagttttttgac
aattccgaagtggctggtgaagggtacctgacagcaagcaacggagcgacgacagtcacg
gctcccttcggttatgtggatatcgtcaatacagcagaggacctcgacgccgcactcaag
ggtggctctagcagcgatgagttggccgagctgggagacgacgtgctcaccggcggtgac
ggtgatgacatcatcttcggcgatgccatcaattccgaccacctcgagtggacgaacctc
gacactggcgagatcttctccgatggcagccacgatggactgggctatgcggggctggtc
gaatacttgcgctgggcggagggcactccaggtgaggccccgagcgacgctgagataatc
gcctatgtgaagtcacgctgggaggagctggtagatactcagcgagccgatggcggcaat
gatttcctcgacggaggctcgggggatgacgtcctgatcggcggtgcgggggatgacgtc
ctgatcggcggtgcgggcgatgacgctctgatcggcggtgctggtgacgacacccttctc
ggcggccttggcgcagataccttcgcctggaaactcggtgaccagggcgaagagggcagc
gccgcggtcgatactgtcgaggacttctcgttggcccagggtgacagcctggatctgagc
gaattgctcagcgacggcaatgggctcgagcacctgcgcttcgaagccgatgggagcggc
accaccaagctctacatcagcacggaaggcaacttcggaaccgatgaggggaacttcgac
aatgcgctggccgaccaggtcatcgtgctggagaacttcagtggggatctcgaggcgctg
aagtcgagcctcaatatcgactga
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integrated database retrieval system
