Halomonas sp. SS10-MC5: I4484_12050
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Entry
I4484_12050 CDS
T07024
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I4484_12050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcam02000
]
I4484_12050
02044 Secretion system [BR:
hcam02044
]
I4484_12050
Transporters [BR:
hcam02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
I4484_12050
Secretion system [BR:
hcam02044
]
Type I secretion system
Adhesin protein transporter
I4484_12050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
QPP47989
LinkDB
All DBs
Position
complement(2577017..2579188)
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AA seq
723 aa
AA seq
DB search
MTQQEVLDSSLGAARSAVRDELLECLQTIALAHDHAVTPDALTAGLPLEEGRLTPGVFPR
AATRAGMTARIVKSRLAQLNPALFPAVLLLEPGRACVLMALDFKARRARVIFPELGDAVS
EVDLEGLSESYSGQAIYVRPRFRFDARGPEVGKQRSRHWFWGVIRENRRLYRDVIAGSII
INLFAVAMPLFVLNVYDRVVPNHATETLWVLAAGIFIVLCFDLALRLMRSAFIDLAASRA
DVKLSAKIMSQVLGLRMEARPASTGSFASTLQSFESVRAFIGSATVVALVDLPFVLFFAA
IIALIGAPLALPVLAGIVVVLLYAMAAQGKLHELSETTWRVSAQRNATLVESLSHLETVK
TLRAESRLQGIWEKSTAFLSRTSAQLRLVSTSVSNVAMWAQHTVAVCVILIGVYLIIDGN
LSQGGLIAAYMLSSRAMAPVSQAAALLAQYHQSSTALKSLDDVMQRPVERPEGKSFISRP
VVHGEIRFDKASLRYPDEERDALRDISLKIEPGEKVALLGRVGCGKTSLNKLLLGLYAPT
AGSVMLDGVDLRQFDPVELRRHIGYVPQDVSLFFGSLRDNIVAGGGSDGVDDEALLHAIK
LSGLESLVNGHPQGVELQVGERGQMLSGGQRQAVAIARALVHDPKILLLDEPTSSMDHAS
EEAFKANLASYGQGKTLIVVTHRTSLLSLVDRIIVIDAGKVVADGPRDKVVEALRKGQIG
RAN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgacacagcaagaagtactggattcctccctgggtgcagcccgctcggccgttcgcgac
gagctgctcgagtgcctgcaaaccatcgccctggcccatgaccatgcggtgacgcccgat
gcattgacggcgggcctgccgctggaagaggggcggctcactcccggtgtctttccccgg
gccgccacccgggccggcatgacggcgcgaatcgtcaagagccggctggcgcagctcaat
ccggcactctttcccgccgtactgctactggagccggggcgtgcctgcgtgctcatggca
ctggacttcaaggcgcgccgtgccagggtgatcttccccgagcttggcgatgccgtgagc
gaggtcgatctcgaaggcctgagcgagagctacagcggccaggccatctacgtgcgtccg
cgctttcgtttcgatgcgcgcggtcccgaggtcggcaagcagcgctcgcgccactggttc
tggggcgtcatccgcgagaaccgacggctttatcgcgacgtgatcgccggctccatcatc
atcaacctgtttgccgtggccatgccgctgttcgtcctgaacgtgtatgaccgcgtggtg
cccaaccatgccacggagacgctatgggtgctggccgccggcatcttcatcgtgctctgc
ttcgacttggcactgcgtctgatgcgcagcgccttcatcgacctggcggcgagtcgggcc
gacgtcaagctctccgcgaagatcatgtcccaggtactgggcctgcgcatggaagcccgg
cccgcctcgaccggctcgttcgcctccaccctgcaatccttcgagtcggtgcgcgccttc
atcggctcggccacggtggtggcattggtcgacctgcctttcgtgctgttcttcgccgcc
atcattgccttgatcggggcgccgctggcgctgccggtacttgccggcatcgttgtcgtg
ctgctctacgccatggcggcccagggcaagctgcacgagctttccgagaccacctggcga
gtcagtgcccaacgcaatgccacgctggtggagtcgctgtcgcacctggaaacggtcaag
accctgcgcgccgagagccggctccagggaatctgggagaagtcgacggcctttctgtcg
cgtacctcggcccaactgcgcctggtcagcacctcggtttccaacgtggcgatgtgggcc
cagcataccgtggcggtctgcgtgatcctgattggcgtctacctgatcatcgacggcaat
ctcagtcagggtgggctcattgctgcctatatgctctcgtcccgtgccatggcgccggtg
agccaggcagccgcgttgctggcccagtaccatcagtcgtccaccgccttgaagtctctc
gacgacgtcatgcagcgcccggtggagcggcccgaaggcaagtccttcatctcgcgcccg
gtcgttcatggtgagattcgtttcgacaaggcgtcgttacgctacccggacgaggagcgc
gatgcgctacgcgacatctcgctcaagatcgagcctggcgagaaggtggccttgctgggg
cgtgtcggttgtggcaagacctcgctcaacaagctgttgctggggttgtatgcgcccacg
gcgggttcggtaatgctcgacggggtggacctgcgacagttcgatccggtggagctgcgg
cgccacatcggctacgtgccgcaggacgtcagcctgttcttcggttcgctgcgtgacaat
atcgtggccggtggcggcagcgatggtgtcgacgacgaggcgctgctgcatgcgatcaag
ctcagcggcctggaaagcctggtcaatggccacccccaaggcgtcgagcttcaggtgggc
gaacgtggccagatgctctccgggggccagcgccaggcagtggccattgcgcgagcactg
gttcatgacccgaagatcctgttgctcgacgaaccgaccagctccatggatcacgccagt
gaggaggccttcaaggccaatctagcaagttacgggcagggcaagacgctgatcgtggtg
actcaccgtacctcattgctgtcgctggtcgatcgcatcatcgtcatcgacgccggcaag
gtcgttgccgacggcccgcgtgacaaggtcgtggaagccctgcgcaagggccagatcggg
agggccaactga
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