Halomonas sp. SS10-MC5: I4484_12235
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Entry
I4484_12235 CDS
T07024
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam02020
Two-component system
hcam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I4484_12235
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I4484_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcam03021
]
I4484_12235
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hcam02035
]
I4484_12235
Transcription machinery [BR:
hcam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I4484_12235
Bacterial motility proteins [BR:
hcam02035
]
Flagellar system
Flagellar assembly proteins
Stator
I4484_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QPP48025
LinkDB
All DBs
Position
complement(2621125..2621829)
Genome browser
AA seq
234 aa
AA seq
DB search
MYTARGKIEQADLLDEYLPLVRRQALSMQVRLPSSIELDDLIQAGTVGLLEAMGRFDASQ
GASFATFASQRIRGAMLDELRSRDWLPRSVRRNARAVDEAVRRLEQSLGRPAEETEIAGE
LDMGLEEYRQLLSDTNSGHLLPFEALMAEGVEPGIEDASIDTPYRMLIDEEKRRQLAEGI
EALPEREKLLMALYYQEELNLKEIGVVLGVTESRVCQLHSQAVSRLRARLAEHD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagcacgaggcaagatcgaacaggcggacctgctggatgagtacctgccgctg
gtgaggcgccaggcgctttccatgcaggttcggctaccgtcgagcatcgaactcgacgac
ctgattcaggccggtacggtggggctgctcgaggccatgggccgcttcgatgcgagccag
ggggccagctttgccaccttcgccagccagcgcattcgcggcgccatgctcgatgagctg
cgcagccgggactggctgccacgcagcgtcaggcgcaacgcccgggcggtcgacgaggcg
gtgcggcgtctggagcagtcgctgggacgccccgccgaggagaccgagatcgccggtgaa
ctcgacatggggctggaggagtatcgccaactgctcagcgataccaacagcgggcacctg
cttcccttcgaggcgctgatggccgaaggggtcgagcccgggatcgaggacgcctcgatc
gacacgccctaccgcatgctcatcgacgaggagaagcgccggcaactcgccgagggcatc
gaggcgcttcccgagcgcgaaaagctgctgatggcgctgtactaccaggaggagctcaac
ctcaaggagatcggcgtcgtgctgggcgtgaccgaatctcgggtctgccagttgcacagc
caggcggtgagccgtctgcgggcgcgcctggcagaacacgattaa
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