Halomonas sp. SS10-MC5: I4484_12845
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Entry
I4484_12845 CDS
T07024
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcam03032
]
I4484_12845
03036 Chromosome and associated proteins [BR:
hcam03036
]
I4484_12845
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_12845
DNA replication proteins [BR:
hcam03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I4484_12845
Chromosome and associated proteins [BR:
hcam03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I4484_12845
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I4484_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QPP48133
LinkDB
All DBs
Position
2758190..2758486
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSIKEVESAVRLILDDITDTLAEGGRVEIRGFGSFSLHYREPRV
GRNPKTGEPVALEGKFVPHFKPGKELREQVNASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttgatcgaacagatcgccatgcgccagcctgagctctcgatcaag
gaagtcgaatccgcggttcgcctgattctcgacgacatcaccgacacgctggccgagggg
ggacgggtcgagatccgggggttcggcagcttctccctgcactaccgggagccgcgggtc
ggtcgcaaccccaagaccggcgaaccggtcgcactggagggcaagttcgtgccacacttc
aagcctggcaaggaactccgcgagcaggtcaatgccagccgcgccctcggctattaa
DBGET
integrated database retrieval system
