Halomonas sp. SS10-MC5: I4484_14295
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Entry
I4484_14295 CDS
T07024
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam00071
Fatty acid degradation
hcam00280
Valine, leucine and isoleucine degradation
hcam00310
Lysine degradation
hcam00362
Benzoate degradation
hcam00380
Tryptophan metabolism
hcam00410
beta-Alanine metabolism
hcam00640
Propanoate metabolism
hcam00650
Butanoate metabolism
hcam00907
Pinene, camphor and geraniol degradation
hcam00930
Caprolactam degradation
hcam01100
Metabolic pathways
hcam01110
Biosynthesis of secondary metabolites
hcam01120
Microbial metabolism in diverse environments
hcam01200
Carbon metabolism
hcam01212
Fatty acid metabolism
Module
hcam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I4484_14295 (fadB)
00650 Butanoate metabolism
I4484_14295 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I4484_14295 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I4484_14295 (fadB)
00310 Lysine degradation
I4484_14295 (fadB)
00380 Tryptophan metabolism
I4484_14295 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I4484_14295 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I4484_14295 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I4484_14295 (fadB)
00930 Caprolactam degradation
I4484_14295 (fadB)
Enzymes [BR:
hcam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I4484_14295 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I4484_14295 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I4484_14295 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I4484_14295 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QPP48392
UniProt:
A0A7T2DB98
LinkDB
All DBs
Position
complement(3059406..3061580)
Genome browser
AA seq
724 aa
AA seq
DB search
MIYQGNAITVARGTSSGGDDIAMLTFDLKDESINKLSSAVVAELDEAVHAIRAQSGLKGL
VIGSAKEVFIVGADITEFHGIFEKGEEYLVEMNLKVHEIFNAIEDLPFPTVTAINGLALG
GGCEVTLTTDFRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGSDNAVEWIAGGGENRA
DAALKVGAVDAVVPNEQLEAAALDILARANAGELDYQARRAEKTGPLKLNAIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGEERARAQAIEAKAFAKLALTDVCYNLVGLFLN
DQVVKKKAGKYEKQAKAVKQAAVLGAGIMGGGIAYQSASKGTPILMKDIKEDAIELGLKE
SRKLFAKQVERGKLSTEQMAEKLTHIRPTLSYGDFGHVDLVVEAVVENPKVKDAVLTEVE
GLVSEDTILTSNTSTISITRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTGDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEQGADFQRVDKVMEKFGWPMG
PAYLLDVVGMDTAVHANEVMAEGFPERMARDGKTAIQVMFENERLGQKNAKGFYAYEEDK
KGKPKKVSDEKAYELVKQVVQQEKAFSDEDIIARMMVPLCLETVRCLEDGIVETPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLADGLAEELGALYAPTDKLRQMAEAGERFYP
KAQG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaacgccatcacggtggcacgcggtaccagtagcgggggcgacgac
atcgccatgctcaccttcgatctgaaggacgagtccatcaacaagctgtcgagcgcggtg
gtggccgaactggacgaggccgtccacgccatccgtgcccagagcggcctcaagggactg
gtcatcggcagcgccaaggaagtcttcatcgtcggggccgacatcaccgaattccacggc
atcttcgagaagggcgaggagtacctggtcgagatgaacctcaaggtgcacgagatcttc
aacgccatcgaggatctgccgttccccacggtcaccgccatcaacgggctggcgctgggt
ggcggttgcgaagtgacgctgaccaccgatttccgggtgatgagcgagaaggccaagatc
ggcctgcccgaaaccaagctcggtatcctgcccggctgggggggctgcgtacgcttgcca
cgcctgatcggttcggacaacgccgtggagtggatcgccggcggcggcgagaaccgtgca
gatgccgctctcaaggtgggcgcggtggatgccgtggtgccgaacgagcagctcgaggcg
gcggccctggacatcctcgcgcgagccaacgccggtgagctcgactaccaggcgcgtcgt
gccgagaagaccgggccgctcaagctcaacgccatcgagcagatgatggccttcgagacc
gccaagggctacgtggccggcaaggcggggccgcactacccggcgccggtcgaggcgatc
aaggtgatccagaagggcgccggcgaggagcgcgcccgcgcccaggccatcgaggccaag
gccttcgccaagctggcgctgaccgacgtctgctacaacctggtggggctgttcctcaac
gatcaggtggtcaagaagaaggccggcaagtacgagaagcaggccaaggcggtcaagcag
gcggcggtgctgggggccggcatcatgggtggcggcatcgcctaccagagtgcctccaag
ggcacgccgatcctgatgaaggacatcaaggaggacgccatcgagctgggcctcaaggag
tcgcgcaagctgtttgccaagcaggtggagcgcggcaagctcagcaccgagcagatggcc
gagaagctgacccacatccgcccgacactctcctacggcgatttcggtcatgtcgacctg
gtggtcgaggcggtggtcgagaaccccaaggtcaaggacgcggtgctgaccgaggtggaa
ggcctggtcagcgaggacaccatcctcacttccaacacctcgaccatctcgatcacccgc
ctggcccagaacctcaagcgccccgagaacttctgcggcatgcacttcttcaatccggtg
caccgcatgccgctggtcgaagtcattcgcggcgagaagaccggcgacgccgcggtggcg
gctaccgtggcctatgcccgggccatgggcaagacgccgatcgtggtcaacgactgcccc
ggcttcctggtcaaccgcgtgctgttcccctatttcggcggcttcagcctgctggtcgag
cagggcgccgacttccagcgcgtcgacaaggtgatggagaagttcggttggcccatgggc
ccggcctacctgctcgacgtggtgggcatggacaccgccgtgcatgccaacgaggtgatg
gccgaaggcttccccgagcgcatggcgcgggacggcaagacggcgatccaggtcatgttc
gagaacgagcgcctgggccagaagaacgccaagggcttctatgcctacgaggaagacaag
aagggcaagccgaagaaggtcagcgacgagaaggcctacgaactggtcaagcaggtcgtc
cagcaggagaaggcgttctccgatgaggacatcatcgcccgcatgatggtgccgctgtgc
ctggagaccgtgcgctgcctggaagacggcatcgtcgagaccccggccgaagccgacatg
gcgctgatctacggcatcggtttcccgccgttccgcggcggcgcgttgcgctacatcgac
gccatgggcgtggctgagttcgtcaagctggccgacggcctggccgaggagctgggcgca
ctctacgcccccaccgacaagctgcgccagatggccgaggccggcgagcgcttctatccc
aaggcccagggctga
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