Halomonas sp. SS10-MC5: I4484_15260
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Entry
I4484_15260 CDS
T07024
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
I4484_15260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
OB_PDCD11
T2SSK
HHH_6
RuvX
Spt6_S1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QPP48562
LinkDB
All DBs
Position
complement(3268285..3270639)
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AA seq
784 aa
AA seq
DB search
MDATTRIISRLAEELAVRPQQVSATVELLDGGATVPFIARYRKEVTGGLDDTQLRNLDER
LRYLRELEERRAAVLAAIDEQGKLTPELERQLQAADTKQRLEDLYLPYKKKRRTKAQIAR
EAGLEPLADALLADPALDPEIEAAQYLRPAEGDIPAIEDAKAALDGARQILMERFAEDPE
LVGALRERLWSEGELSARLLEGKEREGAKFSDYFEHDEPLAKVPSHRALAMFRGRNEGVL
TLAIRLPGEDEAPIHPAQVTIARHFDIRDEGRAADKWLADVVRWTWRVKLYTHLETELMG
RLRERAELEAIEVFAANLKDLLLAAPAGQKATLAIDPGLRTGCKVAVVDPTGQFLEHATI
FPHAPRNAWDESLAQLARLVEKHDVALIAVGNGTASRETDKLAGELVKAFAGRKALSKVM
VSEAGASVYSASEYAARELPELDVTIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV
SQLQLSKSLEAVIEDCVNAVGVDLNTASSALLSRVAGLNPALAENIVARRNAEGAFASRQ
QLLDVSRLGPKTFEQCAGFLRIMNGENPLDASAVHPEAYPVVERIASRSGRPVASLIGDS
ATLKAVKPAEFADERFGVPTISDILKELDKPGRDPRPEFKAAEFREGVETLKDLEPGMIL
EGSVTNVTHFGAFVDIGVHQDGLVHISALSDKFVEDPRSVVKAGDIVKVKVMSVDLERAR
IGLSMRLTDQPGEAEGGRSSRAGQGERRGGQGKAARKGTPREPSQPNQMGALGAALLKAR
KGKS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgacccggatcatttcgcgcctcgccgaggaactcgccgttcgcccgcag
caggtgtcagccaccgtggaactgctcgacggtggcgccaccgtgcccttcatcgcccgc
taccgcaaggaggtcaccggtgggctcgacgatacccaactgcgcaacctcgacgaacgc
ctgcgttacctgcgcgagctggaagagcgccgtgccgccgtgctcgccgccatcgacgaa
cagggcaagctgaccccggagctcgagcgacagctccaggccgccgacaccaagcagcgc
ctggaagatctctacctgccctacaagaagaagcgccgcaccaaggcccagatcgcccgc
gaggcgggcctcgagccgctggccgatgcgctgctggccgatcccgcgctcgaccccgag
atagaagcggcccagtatcttcgccccgccgagggcgatattccggccatcgaggatgcc
aaggcggcgctggacggcgcgcgccagatcctgatggagcgcttcgccgaggaccccgag
ctggtcggtgcgctgcgcgagcggctgtggagcgagggggaactcagcgcccggttgctc
gaaggcaaggagcgcgaaggcgccaagttctccgactatttcgaacacgacgagccgctg
gccaaggtgccttcacaccgggcgctggcgatgttccgcggtcgcaacgagggcgtgctg
acgctggccatccgcctgcccggcgaggacgaggcgccaatccaccccgcccaggtgacc
atcgcccggcacttcgatattcgcgacgaaggccgcgccgccgacaagtggctggccgac
gtggtgcgctggacctggcgggtcaagctctatacccatctcgagaccgagctgatggga
cgactgcgcgaacgtgccgagctcgaggccatcgaggtctttgccgccaacctcaaggac
ctgctgctggccgcccccgcggggcagaaggcaacgctggccatcgacccgggcctgcgc
accggctgcaaggtggcggtggtagaccccaccggccagttcctcgagcacgccacgatc
tttccccatgcgccccggaatgcttgggacgagtccctggcccagctcgccaggctggtg
gaaaagcacgacgtggcgctgatcgccgtgggtaacggcaccgccagccgcgagaccgac
aagctggccggcgagctggtcaaggccttcgccgggcgcaaagcgctctccaaggtgatg
gtcagcgaggccggcgcctcggtctactcggcttccgaatacgcagcccgcgagctgccc
gaactcgacgtcaccattcgcggggcggtctccatcgcccgtcgcctgcaggacccgctg
gcggagctggtcaagatcgagcccaagtccatcggcgtgggccagtaccagcacgacgtc
tcgcagctgcagctgtcgaagagcctggaggcggtgatcgaggactgcgtcaacgccgtg
ggggtcgacctcaacacggcctccagtgcgctgttgtcgcgggtggccgggctcaacccg
gcgctggccgagaacatcgtcgcgcggcgcaacgccgagggtgccttcgccagccgccag
cagctgctcgacgtcagccgcctgggccccaagaccttcgagcagtgtgcgggcttcctg
cgcatcatgaacggcgagaacccgctcgatgccagcgccgtgcaccccgaggcctacccg
gtggtggaacgcatcgccagccgcagcggtcgcccggtagccagcctgatcggcgacagc
gccacgctgaaggcggtcaagccggccgagttcgccgacgagcgcttcggcgtgcccacc
atcagcgacattctcaaggagctcgacaagccgggccgtgacccgcgtcccgagttcaag
gccgccgagttccgcgagggcgtggagacgctcaaggacctggagccgggcatgatcctc
gagggcagcgtgaccaacgtcacccacttcggcgccttcgtcgacatcggcgtgcatcag
gatggcctggtgcacatctcggcgctctccgacaagttcgtcgaggatccgcgctcggtg
gtcaaggccggcgacatcgtcaaggtcaaggtgatgagcgtggatctcgagcgcgcacgc
atcgggctctccatgcgcctgaccgatcagcccggtgaggccgagggcggcagatcgtcg
cgcgctggccagggcgaacggcgcggcggccagggcaaggcagcgcgcaagggcacgccc
cgcgagccgtcccagccgaaccagatgggtgcgctgggggccgcgctgctcaaggccagg
aagggcaaatcttga
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