Halomonas sp. SS10-MC5: I4484_17055
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Entry
I4484_17055 CDS
T07024
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I4484_17055 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_17055 (recC)
Enzymes [BR:
hcam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I4484_17055 (recC)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I4484_17055 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QPP48896
LinkDB
All DBs
Position
3673789..3677430
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AA seq
1213 aa
AA seq
DB search
MPFASPQENALTPGFMVVHGNRLEDLRGVAVEWMKRHPLAPLENETILVQSNGIGQWMKL
ALAADEADGGSGIAAALDVTLPARFLWQAYRAVLNHVEGDPNAVPATSPFDKSRLLWRLL
RLLPELMPRDEFAPLRRFLEGDSDLRKHHQLAERLADLLDQYQVYRADWLEAWSRGEDVL
ISARGEARPIDDTQRWQPALWRAVVNSVAEDVGDDGVASSRAMVHRRFLAAARELRGNEC
PPGLPRRVMVFGISSLPQQALEALAAIARCCQVVLCVHNPCQHYWADIIEHKDLLRAQRY
RQRRKAGMPERLDVLGLGDAGGDGAESLHLHAQPLLAAWGKQGRDYLRLLDEHDDAQQYE
ALFRADSLRIDLFEPFVREGDGRLLQQLQDDIRELRPLHETRETWPAVDPSRDDSIVFHA
AHSPQREVEILHDQLLAAFSADPKLKPRDVIVMVPDIDHYAPHVQAVFGQLERDDPRHIP
FTLSDQGSRHRLPLLIALEKLLRLPELRLSVSDLLDLLDVPALRARFGIDEQDVPTLRRW
IEGAGIRWGLDAGQRGSLDLPAGMEQNTWAFGLRRLLLGYAVGEAASGPWQGIEPFDDIG
GLEAALAGPLAALLETLEAQWRRLREPTDLAGWVAHLRTLLEAGFLAEAPEDSLMLAQLE
QALQSWQESAEEAGLTRDLPLSVVREHWLAQIDEPSLSQRFLAGAVNFATLMPMRAIPFK
RVCLLGMNDGDYPRSHPPMDFDLMNGDYRPGDRSRREDDRYLFLEALLSAREQLYVSWVG
RSIVDNSEKPPSVLVGQLRDHLQAGWRTSDGSDLLEALTTEHPLQPFSRTYFPTAAQQAE
RSVAARRLFTYAHEWREVHGEVAAAAAPLDLEPYTQDTPLTLSQLGNFLRDPARAFFTTR
LKVFLEREDIVSLDHEPFDLDGLANWQLQDLLIREQRRAVDEGRERLPVLLDALDRLQGQ
GVLAMGAFGERMREQLSEPMDALFEAYEEALEAWPHAIEEPEPVQLDVPGAPPIEDWLDE
LRESDSGERCRLVLASSSLVKKGKYRWSHILRHWVAHLAGHLNDRPMTSLLLSKAGHVTL
PPLDPEAARGHLREIVRTWQAGMQVPLPLACDTAFVWLSKLGTPDTERDSDAWRAAASTY
NGDDFNAGEAGRNAYLAHRWPSFTALYEARQDRLGFAELTERLLAPVHLAVKGDKKEEGK
SKEGRGKTVGGKA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgcctccccccaggagaatgccctcacccccggcttcatggtcgttcacggc
aatcgcctggaggacctgcgcggcgtggcggtggagtggatgaagcgccacccgctggca
ccgctggagaacgagaccatcctggtgcagagcaacggcatcggccagtggatgaagctg
gcgctggccgccgacgaggccgacggcggcagcggaatcgccgccgcgctggacgtcacg
ctgccggcgcgcttcctgtggcaggcctaccgcgcggtgctcaaccacgtggaaggcgac
cccaatgcggtgccggccacctcgcccttcgacaagtcgcgcctgctgtggcggctgctg
cgcctgctgccggagctgatgccgcgcgacgagttcgctccgctgcgccgcttcctcgaa
ggcgacagcgacctgcgcaagcaccaccagctcgccgagcgcctggctgacctgctcgac
cagtaccaggtgtaccgcgccgactggctcgaggcctggtcccgcggcgaggacgtgctg
atctccgcccgcggcgaagcccgccctatcgacgacacccagcgctggcagcccgccctg
tggcgtgccgtggtgaacagcgttgccgaggacgtgggcgacgacggcgtggcctccagc
cgcgccatggtgcaccggcgctttctcgccgccgcccgcgagcttcgcggcaacgagtgc
ccccccggcctgccgcgacgggtgatggtgttcggcatctcctcgctgccgcagcaggcg
ctggaggccctggccgccatcgcccgctgctgccaggtggtgctgtgcgtgcacaacccc
tgccagcactactgggccgacatcatcgaacacaaggacctgctccgtgcccagcgctac
cgacagcggcgcaaggccggcatgcccgaacggctcgacgtgcttggccttggcgacgcc
ggtggtgacggagccgagagccttcacctgcacgcccagccgctgctcgccgcctggggc
aagcagggccgcgactacctgcgcctgctcgacgagcacgacgacgcccagcagtacgag
gccttgttccgggccgactcgctgcgcatcgacctgttcgagcccttcgtgcgcgaaggc
gacggccggctgctgcagcagttgcaggacgacatccgcgagctgcgcccgctgcacgag
acccgcgagacctggccggcggtggacccgagccgcgacgactccatcgtcttccacgcc
gcccacagcccccaacgcgaagtggaaattctccacgatcagctgctcgccgccttcagc
gccgacccgaagctcaagccccgcgacgtgatcgtgatggtgccggatatcgaccactac
gcgccgcacgtgcaggcggtattcggacaactggaacgcgacgacccgcgccatatcccc
ttcaccctctccgaccagggcagccgccaccgcctgccgctgctgatcgcgctggagaaa
ctgctgcgcctgccggagctgcgcctctcggtgagcgacctgctcgacctgctcgacgtg
cccgccctgcgcgcccgcttcggcatcgacgagcaggacgtgcccaccctgcgccgctgg
atcgagggcgccggcatccgctgggggctcgacgccggccagcgcggcagcctcgacctg
cccgccggcatggagcagaacacctgggccttcggcctgcgccggctgctgctgggctac
gccgtgggcgaggccgccagcggcccgtggcagggcatcgaacccttcgacgacatcggc
gggctggaagcggcgctggccggcccgctggccgctctgctggagaccctggaggcgcaa
tggcgccgcctgcgcgagcccaccgacttggccggctgggtagcgcacctgcgcaccctg
ctggaggcgggctttctggccgaagcgccggaagacagcctgatgctggcccagctcgaa
caggcgctgcagagctggcaggagagcgccgaagaggccggcctgacccgcgacctgccg
ctctcggtggtgcgcgagcactggctggcccagatcgacgaacccagcctgtcgcagcgc
ttcctggccggcgcggtcaacttcgccaccctgatgccgatgcgcgccatccccttcaag
cgggtgtgcctgctgggcatgaacgacggcgactacccgcgcagccacccgccgatggac
ttcgacctgatgaacggcgactaccgccccggcgaccgctcccgccgcgaggacgaccgc
tacctgttcctcgaagcgctgctctccgcccgggagcagctctatgtcagttgggtgggt
cgcagcatcgtcgacaacagcgaaaagccgccctcggtgctggtcggccagctgcgcgat
catctccaggccggctggcgtacaagcgatggcagcgacctgctcgaagccctcaccacc
gagcatccgctgcagccgttcagccgcacctacttccccaccgccgcgcagcaggccgag
cgcagcgtcgccgcccggcggctgttcacctacgcccacgagtggcgcgaggtgcatggt
gaagtagccgcggcagcggcgcccctcgacctggagccatatacgcaggacacaccgcta
acgctgtcccaactcggcaacttcctgcgcgacccggcccgcgccttcttcaccacccgg
ctcaaggtcttcctggagcgcgaggacatcgtcagcctcgaccacgagcccttcgacctg
gacggcctcgccaactggcagctacaggacctgctgatccgcgagcagcgccgcgccgtg
gacgaaggccgcgagcgcctgcccgttctgctcgacgccctcgaccgtttgcagggccaa
ggcgtactggccatgggcgccttcggcgagcgcatgcgcgagcagctcagcgaaccgatg
gacgctctgttcgaagcctacgaggaagcgctggaagcctggccccacgccatcgaggag
cccgagccggtgcagctcgacgtgcccggcgccccccccatcgaagactggctcgacgaa
ctgcgcgagagtgactcgggcgagcgctgccgcctggtgctcgccagcagcagcttggtc
aagaagggcaaataccgctggtcgcacatcctgcgccactgggtcgcgcacctggccggg
cacctgaacgacaggcccatgaccagcctgctgctctccaaggccggccacgtcaccctg
ccgcccctcgatccggaagcggcccgcggacatctgcgcgagatcgtccgcacctggcag
gccggcatgcaggtgccgctgccgctggcctgcgacaccgccttcgtgtggctgagcaaa
ttgggaacgcctgataccgagcgcgacagcgacgcctggcgcgccgccgccagcacctac
aacggcgacgacttcaacgccggggaggcgggccgcaacgcctacctcgcccaccgctgg
ccgagcttcaccgcgctctatgaagcccgccaggaccggctcggcttcgccgaactcacc
gagcggctactcgccccggtacacctggcggtgaaaggcgacaagaaagaagaagggaag
agcaaagagggaagagggaagacagtgggaggcaaggcatga
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integrated database retrieval system
