Halomonas sp. SS10-MC5: I4484_17065
Help
Entry
I4484_17065 CDS
T07024
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I4484_17065 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_17065 (recD)
Enzymes [BR:
hcam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I4484_17065 (recD)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I4484_17065 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_28
DUF3375
NTPase_1
DEAD
AAA_25
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QPP48898
LinkDB
All DBs
Position
3681398..3683755
Genome browser
AA seq
785 aa
AA seq
DB search
MSKRSKHHDDATPDLFADLGEEPAGRSQAADEGAEPEPPQAEPKPNQAAQGNVQAALHDT
QALFALLDRWVERGWLRALDRALASFFQREMSDAPPLLLLAAALASHQLGRGHVCLDLAQ
TLAAPDLALSLPPEGDDLSDPPPLPSELLAELDLAIWHDALHHPALVADGNEPPGNTPLV
RSERDGNVRLYLRRYWQYEQDIRGLIGSRLTAATEAEADTVTLARALAALFTPGHELDWQ
QAACALASRSRFAVITGGPGTGKTTTVVKLLALLQALALGETAPVGSAAPRPLRIRLAAP
TGKAAARLNESIAKQVQNLSLVELAAAVGQQGVDIPTLRNSIPTEVTTLHRLLGSRPDTR
HFRHHAGNPLALDALVIDEASMVDIEMMAAVLTALPPRARLILLGDKDQLASVEAGAVLG
DLCQRAEGGHYTPATCGWLQRVTGTPIPEQYRDETGQPLDQAIAMLRVSHRFDAKSGIGQ
LAAAVNRPLAPEHGQKEKKRAVREIFGTDGKSRYADIARLALADADDPALDRLVVNGNPA
GFINGGEGRHDRRGEPIAPPRGYAHYLDVMQAARPTQPFFGEGDARPPYDDWARQVLAAH
GHFQLLCALRKGPWGIEGLNPRIGRALRRAGWLKASDLELEQGWFEGRPVLVTRNDYGLG
LMNGDIGITLAVPEARSASEMAGRTLLRVAFPASDGSGDIKWVLPSRLQAVETVFAMTVH
KSQGSEFTHTALLLPDAPNPILTRELVYTGITRARDWLTLVETGRGMLDEAVTREVVRVS
GLGKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcagcaagcaccacgacgacgctaccccggacctgttcgccgatctcgga
gaggaaccagcaggccgcagccaggcagccgacgagggcgccgaacctgaaccgccccaa
gccgagccgaaaccgaaccaggccgcgcagggcaatgtacaagccgcgctccacgacacc
caggcgctgttcgccctgctcgaccgctgggtggagcgcggctggttgcgcgcgctggac
cgcgcactggcgagcttcttccagcgcgagatgagcgacgcccctcccctgctgctgctc
gccgcggcccttgccagccatcagcttggccgcggccacgtgtgcctcgatctcgcccag
actctcgccgcccccgacctggcgctctcgctgccaccggaaggtgacgatttgagcgac
ccgccgccgctgcccagcgagctgctggccgaactggatctcgccatctggcacgacgcc
ctgcaccaccccgccctggtggcggacggcaacgagccgccgggtaacaccccgctggtg
cgcagcgaacgcgacggcaacgtgcggctctatctgcgccgttactggcagtacgagcag
gacattcgcggcctgatcggcagccgacttactgccgccaccgaggcagaagccgacacc
gtcaccctggcccgggcgctggccgcactctttaccccggggcatgaactcgactggcag
caggccgcctgtgcgctggccagccgctcgcgcttcgccgtgattaccggcggccccggc
accggcaagaccaccacggtggtcaagctgctcgccctgctgcaggccttggccctgggt
gaaaccgccccagttggctccgccgcaccgcgcccgctgcgcattcgcctggccgccccc
accggcaaggccgccgcccggctcaacgaatccatcgccaaacaggtgcaaaacctctcg
ctggtggaactggccgccgccgtgggccaacagggtgtggatatcccgaccctgcgcaac
agcatccctacggaagtcacgacactgcaccgccttctgggctcacgaccggatacccgc
cacttccgtcaccacgccggcaacccgctggcgctggacgccctggtgatcgacgaagcc
tcgatggtggatatcgaaatgatggccgccgtgctcaccgccctgccgcccagggcgcgg
ctgatcctgctcggcgacaaggaccagctcgcctcggtggaagccggcgccgtgctcggc
gacctgtgccagcgtgccgaaggcggccactacaccccggccacctgcggctggctgcaa
cgggtgaccggcaccccgattcccgagcaataccgcgacgaaaccggccagccgctggac
caggccatcgccatgctgcgggtgagccaccgcttcgatgccaagagcggcatcggccag
ctcgccgcagcggtcaatcgcccgctcgcacccgagcatgggcagaaagagaagaaacgc
gcggtacgcgagatcttcggcaccgatggaaagtcacgctacgccgacatcgcccgcctc
gccctggcagacgccgacgacccggcgctggatcggctggtggtaaacggcaacccggcc
ggtttcatcaacggcggcgaaggccgacacgaccgccgcggcgagcccatcgcaccgccc
cgcggctacgcccactacctggacgtgatgcaggcagcgcgccccacccagcccttcttc
ggcgaaggcgacgcgcgcccgccctacgacgactgggcgcgccaggtactcgccgcccac
ggccacttccagttgctgtgcgccctcaggaaaggcccctggggcatcgaagggctgaac
ccgcgcatcggccgcgccctgcgccgcgccggctggctcaaggccagcgacctggagctg
gaacagggctggttcgaaggccgcccggtgctcgtcacccgcaacgactacggcctgggg
ctgatgaacggcgatatcggcatcaccctagccgtgcccgaagcgcgcagcgccagtgaa
atggccggccgcaccctgctgcgcgtcgccttcccggccagcgacggcagcggcgacatc
aagtgggtgctacccagccgcctgcaagcggtggaaaccgtgttcgccatgacggtacac
aagtcccagggctcggaattcacccacaccgccctgctgctccccgacgcccccaacccc
atcctcacccgggagctggtctacaccggtatcacccgggcaagggactggctgacgctg
gtggagacgggccgcgggatgctggatgaggcggtaacgagggaggtggtcagggtgagt
ggattgggtaagttgtaa
DBGET
integrated database retrieval system
