Halomonas sp. SS10-MC5: I4484_18220
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Entry
I4484_18220 CDS
T07024
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03030
DNA replication
hcam03430
Mismatch repair
hcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I4484_18220 (ssb)
03430 Mismatch repair
I4484_18220 (ssb)
03440 Homologous recombination
I4484_18220 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcam03032
]
I4484_18220 (ssb)
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_18220 (ssb)
03029 Mitochondrial biogenesis [BR:
hcam03029
]
I4484_18220 (ssb)
DNA replication proteins [BR:
hcam03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I4484_18220 (ssb)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
I4484_18220 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
I4484_18220 (ssb)
Mitochondrial biogenesis [BR:
hcam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
I4484_18220 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
tRNA_anti-codon
SSB_1
Lyase_8_N
DUF3127
Pyridox_ox_2
Motif
Other DBs
NCBI-ProteinID:
QPP49105
LinkDB
All DBs
Position
complement(3917895..3918521)
Genome browser
AA seq
208 aa
AA seq
DB search
MARGVNKVILIGNLGQDPEVRFMPSGSPVANLRVATTDTWTDKQSGQRQERTEWHSVVLF
NRLAEIAQQYLKKGSRVYLEGRLQTRKWQGQDGQDRYTTEIVCNDMQMLDSRSGDFGGQA
GAGMPQQQGGGYGAPQGAPVPQQGGYGAPPQGGGGYGNASQQGGGGYGGQPQQRPAPGGQ
PQQGGQKQNNYGAPDPGSFDDFDDEIPF
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtggcgtcaacaaggtcattctcatcggtaacctggggcaggaccccgaggtc
cgcttcatgccatccggcagccccgtcgccaacctgcgcgtggcaaccaccgacacctgg
accgacaagcagagcggccagcgtcaggagcgcaccgagtggcactcggtggtactgttc
aaccgcctggccgagatcgctcagcagtatttgaagaaagggtctcgggtctacctcgaa
gggcgcctgcagacgcgcaagtggcagggacaggacggtcaggatcgctacaccaccgag
atcgtctgcaatgacatgcagatgctcgattcgcgtagcggcgacttcggtggccaggcc
ggggcgggcatgccgcagcagcagggtggaggctacggcgcaccgcaaggcgcccccgtg
ccgcagcagggcggctacggcgctccgccgcaaggtggtggtggctacggcaacgcctcc
cagcagggtggcggcggctatggcggccagcctcagcagcgcccggcgccgggcggacag
ccccagcagggcgggcagaagcagaacaactacggtgcacccgacccgggtagcttcgac
gatttcgacgacgaaattccgttctga
DBGET
integrated database retrieval system
