Halomonas sp. SS10-MC5: I4484_19300
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Entry
I4484_19300 CDS
T07024
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03030
DNA replication
hcam03410
Base excision repair
hcam03420
Nucleotide excision repair
hcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I4484_19300 (polA)
03410 Base excision repair
I4484_19300 (polA)
03420 Nucleotide excision repair
I4484_19300 (polA)
03440 Homologous recombination
I4484_19300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcam03032
]
I4484_19300 (polA)
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_19300 (polA)
Enzymes [BR:
hcam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I4484_19300 (polA)
DNA replication proteins [BR:
hcam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I4484_19300 (polA)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I4484_19300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I4484_19300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QPP49299
UniProt:
A0A7T1Y3G2
LinkDB
All DBs
Position
complement(4130042..4132825)
Genome browser
AA seq
927 aa
AA seq
DB search
MADTPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAIKGVLNMLKRLIKDYPDSPMAVVFD
AKGKTFRDELFEAYKAQRPPMPDDLRSQVEPLYACVRALGLPLLCVEGVEADDVIGTLAR
LATEAGRDAVISTGDKDMAQLVNGHITLVNTMKDETLDVEGVKAKFGLPPELIIDFLALM
GDKVDNIPGVPGVGEKTALGLLQGMGGGLDTIYADLERVATLDFRGAKSLPSKLEEHREM
AYLSYQLATIKTDCELPVGLGDLDIAHPDREALKRLYTELEFKAWLSELLSGKDEGVDDV
ERGSGVAGTAAAGNLDPEAPPASVAACQNHLILTQAELDEWLARLGACEAFCFDLETNSL
NYMDAEIVGVGLALEPGEAAYVPLAHDYLDVPDQLDRAAVLAALKPLLEDPCRGKIGQNL
KYDISVLANYDIRVQGPLTDTMLESYVLNSTATRHDMDSLALKYLGQKTVSFEEIAGKGA
KQLTFNQIDFEQAVPYACEDVDVTLRLHCELRPRIEAEGRLAEVLDTIERPLIPVLSRIE
RTGVAIDAARLHAQSQELEARIGELETRAFELAGREFNLGSPKQLGEILFEEQKIPVLKK
TPKGAPSTAEAVLEELALDYPLPKVIMEHRGLAKLKSTYTDKLPRLVNKRTGRLHTSYHQ
AVAATGRLSSSDPNLQNIPIRTEEGRKIRQAFIARPGYRIVAADYSQIELRIMAHLSADE
GLLSAFAEGRDIHAATAAEVFGVPLEQVSGEQRRSAKAINFGLIYGMSAWGLSKQLRIER
GQAQTYIDRYFDRYPGVARYMERIRAQAADDGYVETVYGRRLYLPEIRAQNHARRQAAER
TAINAPMQGTAADIIKRAMIEVDAWLQQSAFDACMVMQVHDELVFEVGEAQVGEFIDEVK
ARMQAAAELSVPLIVEAESGANWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacccccatcgttctcgtcgacggttcgtcctatctctaccgcgcctttcac
gccctgccgccgctgaccacctccaacggccagcccaccggcgccatcaagggtgtgctc
aacatgctcaagcggctgatcaaggattaccccgacagccccatggcggtggtcttcgat
gccaagggcaagaccttccgcgacgagctgttcgaggcgtacaaggcccagcgtccgccg
atgcctgacgacctgcgcagccaggtggagccgctctacgcctgcgtccgcgccctgggg
ctgccgctgctgtgcgtcgagggcgtcgaggccgacgacgtcatcggcaccctggcccgg
ctcgccaccgaggccggccgcgacgcggtgatctccaccggcgacaaggacatggcgcag
ctggtcaacggccacatcacgctggtcaacaccatgaaggacgagaccctcgacgtggaa
ggggtcaaggccaagttcggcctgccgccggagctgatcatcgacttcctggcgctgatg
ggcgacaaggtcgacaacatccccggcgttccgggggtgggcgagaagaccgcgctgggc
ctgctgcaaggcatgggcggcgggctcgacaccatctatgccgacctcgagcgtgtcgcc
accctcgattttcgcggtgccaagtcgctgccgagcaagctcgaggagcatcgcgagatg
gcctatctctcctaccagctggccaccatcaagaccgactgcgagctgccggtggggctc
ggcgacctcgacatcgcccatcccgaccgcgaggcgctcaagcggctctacaccgagctc
gagttcaaggcctggctctccgagctgctctcgggcaaggatgaaggggtcgacgacgtc
gagcgcggcagcggggtcgccggtaccgccgcggcgggcaacctcgaccccgaggcgccg
ccggccagcgtggccgcctgccagaaccatctgatcctgacccaggccgagctcgacgag
tggctggcgcggctcggcgcctgcgaggccttctgcttcgacctagagaccaacagcctc
aattacatggatgccgagatcgtcggcgtggggctggcgctcgaacccggtgaagccgcc
tacgtgccgctcgcccacgactacctcgacgtgcccgaccagctcgaccgcgccgccgtg
ctggccgcgctcaagccactgctggaggacccctgccgcggcaagatcggccagaacctc
aagtacgacatctcggtgctggccaactacgacattcgcgtccaggggccgctcaccgac
accatgctcgagtcctacgtgctcaactccaccgccacccgtcacgacatggactcgctg
gcgctgaagtacctgggccagaagacggtgagcttcgaggagatcgccggcaagggcgcc
aagcagctcaccttcaaccagatcgacttcgagcaggccgtgccctacgcctgcgaggac
gtcgacgtcaccctgcgcctgcactgcgagctgcgtccgcgcatcgaggcggaggggcgc
ctggccgaggtgctcgacaccatcgagcggccgctgatcccggtgctgtcgcgcatcgaa
cgcaccggggtggcgatcgacgccgcgcgcctgcatgcccagagccaggagctcgaggcg
cgcatcggcgagctcgagacgcgagccttcgagctcgccgggcgcgagttcaacctcggc
tcgcccaagcagctcggtgagatcctgttcgaggagcagaagatcccggtgctcaagaag
acgcccaagggcgctccttccaccgccgaggcggtgctcgaggagctggcgctggattac
ccgctgcccaaggtgatcatggagcaccgcggcctggccaagctcaagtcgacctatacc
gacaagctgccgcggctggtcaacaagcgcaccgggcggctgcataccagctaccatcag
gcggtcgccgccaccggccggctctcctcgagcgaccccaacctgcagaacatccccatt
cgtaccgaggaggggcgcaagattcgccaggccttcatcgcccggcccggctatcgcatc
gtcgccgccgactactcgcagatcgagctgcgcatcatggcgcatctttctgcggacgaa
gggctgctctcggcctttgccgaggggcgcgacatccacgccgccactgccgccgaggtc
ttcggcgtgccgctggagcaggtctccggcgagcagcggcgcagcgccaaggcgatcaac
ttcgggctgatctacggcatgagcgcctgggggctgtccaagcagctgcgcatcgagcgc
ggccaggcgcagacctacatcgaccgctacttcgaccgctacccgggcgtggcccgctac
atggagcgcatccgcgcccaggccgccgacgatggctacgtcgagaccgtgtacggccgc
cgcctctacctccccgagatccgcgcccagaaccacgcccggcgccaggccgccgagcgc
accgcgatcaacgcgccgatgcagggcaccgcggcggacatcatcaagcgcgccatgatc
gaggtcgacgcctggctgcagcagagcgccttcgacgcctgcatggtgatgcaggtgcac
gacgagctggtgttcgaggtcggcgaagcccaggtgggcgagttcatcgacgaggtcaag
gcgcgcatgcaggccgccgccgaactcagcgtgccgctgatcgtcgaggccgagagtggg
gccaactgggacgaggcgcattga
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