Halomonas sp. SS10-MC5: I4484_19690
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Entry
I4484_19690 CDS
T07024
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hcam
Halomonas sp. SS10-MC5
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcam03016
]
I4484_19690
Enzymes [BR:
hcam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
I4484_19690
Transfer RNA biogenesis [BR:
hcam03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
I4484_19690
Prokaryotic type
I4484_19690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
CLP1_P
nSTAND3
AAA_25
Lactamase_B
MeaB
AAA_18
AAA_16
Anti-Pycsar_Apyc1
NPHP3_N
AAA
AAA_22
NTPase_1
NACHT
ATP_bind_1
AAA_5
AAA_19
AAA_30
APS_kinase
nSTAND_NTPase5
AAA_28
Mg_chelatase
KTI12
AAA_33
TsaE
RuvB_N
AAA_7
ABC_tran
AAA_17
T2SSE
ATPase
Zeta_toxin
RNA_helicase
NB-ARC
AAA_29
AAA_24
AAA_14
ATPase_2
Rad17
PhoH
SRP54
AAA_11
cobW
ResIII
IstB_IS21
TIP49
DAP3
Motif
Other DBs
NCBI-ProteinID:
QPP49362
LinkDB
All DBs
Position
4208302..4210269
Genome browser
AA seq
655 aa
AA seq
DB search
MTTTPELSPDHPLPALLERHRRLLLTGPPGSGKTTLARQVATHLAERGEVCHCLAADPGL
PGFGPPGAICLGRWDVHLGAWRLEALEALTTLDSARFRLPLVEAVRRLAQRVGPGALLVD
APGVERGIGGAELLPALAGAAGVGAVVRLAPAHQPDPYPHERAALGLATLQLAADAAARH
PGKQQRKEWRTAAWDAYLAQAKEQELPLAALAILGTPPPNDAAHAWQGRQVGLLDATGNS
LALGEVLALEGDMLRLLAPALSATPRRLVIRDAVRRREGGLGTAAHVPSPRTSPTCREEE
PALTPALDEQFIGPRPTLRLGNMRATLVNGVFGDPLLHLRLRHRKRSLLFDLGDPGRLPA
RLAHQVSDVFVSHAHADHIGGFLWLLRSRIGDYSPCRVYGPPGLAGHLDGFLRGILWDRV
EEKAPRFEVFELHGERLAHYRLVAGQPMKALSPREVDAGVIHAEPGFRVRATTLDHGTPV
LAFAYEPETQLKVRKEGLEAHGWAPGPWLGELKQRMLERDDAGDIALPDGSRRPVAELAE
LLLFSQPGQRLVYATDFGDTPENRERLRSLAQGAEVLFCEASFREDQAEQARRTGHLTAR
ACGEIAAAAGVGQLVPFHFSRRHVEDVQALYAEIRRHFPRLAATPGSEPDTEALD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacaccggagctgtcccccgaccacccgctgccggcgctgctggagcgccac
cggcgcctgctgctcaccggtccgcccggcagtggcaagaccaccctcgcgcgtcaggtg
gccacccacctggccgagcgcggcgaggtgtgtcactgcctcgccgccgaccccggcctg
cccggcttcggcccgcccggtgccatctgcctggggcgctgggacgtgcacctgggcgcc
tggcgcctggaagccctcgaggcgctgaccaccctcgacagcgcccgcttccgcctgccc
ctggtcgaggcggtacgccgcctggcccagcgagtcgggcccggggcgctgctggtcgac
gcccccggcgtggagcgcggcatcgggggcgccgagctgctgccggcgctggccggcgcc
gccggcgtgggtgccgtggtgcgcctggcgccggcccaccagcccgatccgtatccccat
gaacgcgccgcgctgggcctcgcgacgctgcagctggcggccgacgccgcggcccggcac
cccggcaagcagcagcgcaaagagtggcgcaccgcggcgtgggatgcctacctggcgcag
gcgaaggagcaggagctgcccctggcagcgctggccatcctcggcacgccgccaccgaac
gatgccgcccacgcctggcagggacgccaggtcggcctgctcgacgccaccggcaacagc
ctggcactgggcgaggtgctggcgctggagggcgacatgctgcgactgctggcgcccgcg
ctgagcgccacgccccgccggctggtgatacgcgacgccgttcgtcgtcgcgagggcggc
ctcggtaccgccgcgcacgtcccatcgccacgcacgtcaccgacatgccgcgaggaggag
ccggcacttaccccggcactggacgagcagttcatcggcccgcgcccgacgctgcgcctg
ggcaacatgcgcgccacgctggtcaacggcgtgttcggcgacccgctgctgcacctgcgt
ctgcgccaccgcaagcgcagcctgctgttcgacctgggcgatcccggccggctgccggca
cggctggcccaccaggtcagcgacgtgttcgtcagccatgcccacgccgaccacatcggc
ggcttcctgtggctgctgcgctcacgcatcggcgactactcgccctgccgggtctacggc
ccgcccgggctcgccggccacctggacggctttctgcgcggcatcctgtgggatcgggtg
gaggagaaggcgccccgcttcgaagtcttcgagctgcacggcgagcgcctggcacattac
cgcctggtggcaggccagccgatgaaggcgctctccccgcgcgaggtggacgccggtgtg
atccacgccgagcccggctttcgcgtcagagcgaccaccctggaccacggcaccccggta
ctggccttcgcctatgagccggaaacccagctcaaggtgcgcaaggaggggctcgaggcc
cacggctgggcgccgggaccctggctcggcgagctcaagcagcgcatgctggagcgcgat
gacgcgggcgatatcgcgctgcccgatggcagccggcgcccggtcgccgagctggcggag
ctgctgctgttctcgcagccgggccagcgcctggtctacgccaccgacttcggcgacacc
cccgagaaccgcgagcgcctgcgctcgctggcccaaggcgccgaggtgctgttctgcgag
gcctcgttccgcgaggatcaggccgagcaggcccggcgcaccggccacctgaccgcccgc
gcctgcggcgagatcgccgccgcggccggggtcggccaactggtgccgttccacttctcg
cgccgccacgtggaggacgtgcaggcgctctacgccgagattcgccgccacttcccgcgg
ctggccgccacgcctggcagcgagccggataccgaggcactggattag
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