Halomonas sp. SS10-MC5: I4484_19860
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Entry
I4484_19860 CDS
T07024
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam00300
Lysine biosynthesis
hcam00470
D-Amino acid metabolism
hcam01100
Metabolic pathways
hcam01110
Biosynthesis of secondary metabolites
hcam01120
Microbial metabolism in diverse environments
hcam01230
Biosynthesis of amino acids
Module
hcam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I4484_19860 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I4484_19860 (lysA)
Enzymes [BR:
hcam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I4484_19860 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QPP49392
UniProt:
A0A7T1Y3R7
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All DBs
Position
4244751..4246043
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AA seq
430 aa
AA seq
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MDHFEYRDGVLYGEEVPLSRVAEAVGTPCYVYSKATLARHFRAYTEALGSHPHLICYAVK
ANSNLAVLGLLARLGAGFDIVSVGELERVLAAGGDPAKVVFSGVAKQEAEMARALEVGIK
CFNVESRPELERLNAVAERLGRVAPVSLRVNPDVDAGTHPYISTGLKDNKFGIPVDEALS
VYELAARLPGVRIVGLDCHIGSQLTELAPFLDALDRLLVLLERLRERGITVEHLDLGGGL
GVPYRGERPPQPFDYAASLLERLSRWEHGAGLTLLFEPGRSIAANAGVLLTRVEYLKPGE
TKNFAIVDAGMNDLIRPSLYQAWQAIIPVDTRPMRESATYDVVGPVCETGDFLGKERELA
IDAGDLLAVRSAGAYGFVMASNYNSRPRPAEVMVDGEAFHVVRHRESVASLWAGESLLPE
PAAAQDGERR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcgaatatcgcgacggcgtgctctacggcgaggaggtaccgctgtcgcgg
gtggccgaggcggtcggcacgccctgctacgtctactccaaggcgaccctggcgcgccac
tttcgcgcctataccgaagcactgggcagccacccccacctgatctgctacgcggtcaag
gccaactccaacctggcggtgctgggtctgctggcgcgcctgggcgccggcttcgacatc
gtctccgtgggcgagctcgagcgcgtgctggccgccggcggcgacccggccaaggtggtg
ttctccggcgtggccaagcaggaagccgagatggcccgcgcgctcgaggtcggcatcaag
tgcttcaacgtcgagtcgcgccccgagctcgagcggctcaacgccgtggccgagcggctg
ggccgggtggcgccggtgtcgctgcgggtcaaccccgacgtcgacgccggcacccacccc
tacatttccaccgggctcaaggacaacaagttcggcattccggtggacgaggcgctctcc
gtctacgagctggctgcgcgcctgccgggggtgaggatcgtcggcctggattgccatatc
ggctcgcagctcaccgagctcgcccccttcctcgacgccctggatcgcctgctggtactg
ctcgagcgcctgcgcgaacgcggcatcacggtggaacacctcgacctcggcggcgggctc
ggcgtgccctaccgcggcgagcgcccgccgcagcccttcgactacgccgcctcgctgctc
gagcgcctgtcgcgctgggagcacggcgccggcctgaccctgctgttcgagccgggccgc
tcgatcgccgccaatgccggcgtgctgctgacccgggtggagtacctcaagcccggcgag
accaagaacttcgccatcgtcgacgccggcatgaacgacctgatccgcccctcgctctac
caggcctggcaggcgatcatcccggtggacacccgccccatgcgtgaaagcgccacctac
gacgtggtcggcccggtgtgcgagaccggcgacttcctgggcaaggagcgcgaactggcg
atcgacgccggcgacctgctggcggtacgctccgccggcgcctacggtttcgtcatggct
tcgaactacaacagccggccgcgccccgccgaggtgatggtcgacggcgaggccttccat
gtggtgcgccaccgcgagagcgtggcgtcgctgtgggccggcgagtcgctgctgcccgaa
ccggcagcggcacaggacggagagaggcgctga
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