Halomonas sp. SS10-MC5: I4484_20540
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Entry
I4484_20540 CDS
T07024
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hcam
Halomonas sp. SS10-MC5
Pathway
hcam03420
Nucleotide excision repair
hcam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I4484_20540 (uvrD)
03430 Mismatch repair
I4484_20540 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcam03400
]
I4484_20540 (uvrD)
Enzymes [BR:
hcam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I4484_20540 (uvrD)
DNA repair and recombination proteins [BR:
hcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I4484_20540 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
I4484_20540 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_22
T2SSE
DEAD
Motif
Other DBs
NCBI-ProteinID:
QPP49516
UniProt:
A0A7T1Y3W0
LinkDB
All DBs
Position
complement(4386513..4388720)
Genome browser
AA seq
735 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNMLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYAVLA
VTFTNKAAREMRTRLEALLGLSLRNVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDTDDQ
LRLIKRLLKDHQIDDERYPPRQVQYFISGCKEEGLRPHQVDVHGDAYMAQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDTPALLAHYQERFAHVLVDEFQDTNTLQYAWLKLLTGM
KTPMTVVGDDDQSIYGWRGARIENIRRFEQEFPATHTVRLEQNYRSTSAILDAANALISH
NAERMGKELWTAGARGEPISVYAGFNDLDEARFIVDTIKEKVDEGYRRRDVAILYRSNAQ
SRVLEETLIRQGMPYRIYGGQRFYERLEIKNALAYLRLLLNRDDDASLERIINVPPRGIG
TRTVEQVRERARLAGVSLWQALHDGLMDGALKGRAGASLQAFADLIEGLDNDTAGMSLHE
IIDHVNERSGLVEHHRNEKGEKGQARVENLEELINAARAFTQGESFDPPEAGEGVVALEA
FLAEAALNAGEHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGLTRAMRKLYLTHSEIRRLHGKETFQRPSRFLREIPAEYLEEVRLRGQISRP
VTATRPAVGLSRQTSVDPGGDLPSLSLGQRVQHPVFGEGVILNAEGEGARARVQVSFEGE
GDKWLVLGFAKLTPL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatcctcgatcagttgaacccggcccagcgcgaggcggtgagc
gcgccccagggcaacatgctggtgctggccggggccggctccggcaagacccgggtgctg
gtgcatcgcatcgcctggctgatgcaggctgagggcttgtctccctatgccgtgctggcc
gtgaccttcaccaacaaggcggcgcgcgagatgcgtacgcgcctcgaggcgctgctcggg
ctgtcgctgcgcaacgtctgggtcggtacctttcactccatcgctcatcgcctgctgcgc
acccactggcaggatgcgcggctgccgcagcacttccagatcatcgataccgacgaccag
ctgcgcctgatcaagcgcctgctcaaggatcaccagatcgacgacgagcgctacccgccg
cgtcaggtgcagtacttcatctccggctgcaaggaggaggggctgcgcccgcatcaggtc
gacgtgcacggcgatgcctacatggcccagatggtcgagctctacgagcgctatcagctc
acctgcgaacgcggcggcctggtcgacttcggcgagctgctgctcagaagcctcgagctg
ctgcgcgatacgccggcgctgctggcgcattaccaggagcgcttcgcccatgtgctggtc
gacgagttccaggacaccaacaccctgcagtacgcctggctcaagctgctcaccggcatg
aagacaccgatgaccgtggtgggcgacgacgaccagtcgatctacggctggcgcggggca
cggatcgagaatatccgccgcttcgagcaggagtttccggccacccataccgtgcgcctg
gagcagaactaccgctccaccagcgccatcctcgatgccgccaacgccctgatcagccac
aacgccgagcgtatgggcaaggagctgtggacggccggcgcccgcggcgagccgatttcg
gtgtatgccggcttcaacgacctggatgaggcgcgcttcatcgtcgacaccatcaaggag
aaggtcgacgagggctaccgacgccgcgacgtggccatcctctaccgctccaacgcccag
tcgcgggtgctcgaggagaccctgatccgtcagggcatgccctatcgcatctacggcggc
cagcgcttctacgagcgcctcgagatcaagaacgccctggcctacctgcgcctgctgctg
aaccgtgacgacgacgcctctctcgagcgcatcatcaacgtgccgccgcggggcatcggc
acccgtaccgtggagcaggtgcgcgaacgcgcccgcctggccggcgtgtcgctgtggcag
gcactgcacgacggtctcatggacggcgcgctgaaggggcgcgcgggcgcgtcgctgcag
gcgtttgccgacctcatcgaagggctcgacaacgacaccgccggcatgtcactgcacgag
atcatcgatcacgtgaacgagcgctccgggctggtggagcatcatcgcaacgagaagggc
gagaaggggcaggcccgggtcgagaacctcgaggaactgatcaatgccgcccgcgccttc
acccagggcgaatccttcgacccgcccgaggccggcgagggtgtcgtggcgctggaggcc
tttctcgccgaggcggcgctcaacgccggcgagcacgaggccgacgagttcgaggacagc
gtgcagctgatgacgctgcactcggccaagggtctggagttcccggtggtgttcatcgcc
ggggtcgaggaggggctgttcccgcacaagatgtcgctggaggagccgggccgcctggag
gaggagcgccgcctctgctacgtcggcctgacccgcgccatgcgcaagctctacctcacc
cactcggagatccgccgtctgcacggcaaggagaccttccagcggccgtcgcgcttttta
cgcgaaatccccgccgagtatctggaagaggtgcgcctgcgcggccagatctcgcggccg
gtgacggccacgcgcccggcggtgggcctctcgcgtcagacctcggtcgatcccggcggc
gacctgcccagtctgagcctgggccagcgggtgcagcacccggtgttcggcgagggcgtg
atcctcaacgccgagggcgaaggcgcccgcgcgcgggtccaggtcagcttcgagggcgag
ggcgacaagtggctggtgcttgggttcgccaagctcacccccctgtag
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