KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0162
Entry
HCBAA847_0162     CDS       T02494                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcb03019]
    HCBAA847_0162 (rnc)
   03009 Ribosome biogenesis [BR:hcb03009]
    HCBAA847_0162 (rnc)
   03036 Chromosome and associated proteins [BR:hcb03036]
    HCBAA847_0162 (rnc)
Enzymes [BR:hcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HCBAA847_0162 (rnc)
Messenger RNA biogenesis [BR:hcb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HCBAA847_0162 (rnc)
Ribosome biogenesis [BR:hcb03009]
 Eukaryotic type
  90S particles
   RNase
    HCBAA847_0162 (rnc)
 Prokaryotic type
  rRNA processing factors
   HCBAA847_0162 (rnc)
Chromosome and associated proteins [BR:hcb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HCBAA847_0162 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: BAM31417
UniProt: I7HBX1
LinkDB
Position
173272..174000
AA seq 242 aa
MPKYNPPKNAQALEKKLGYTFKDKKLLLEALTHKSCKNAYNNERLEFLGDAVLDLLVGEF
LFRKFPSAKEGELSKLRACIVNEKGFMKLAKSLDLGAFLHISQSEEHNKGREKASILSNA
FEALMGAIYLESELTFLKDIVLKLLEQNYAKIDLRSLFTDYKTALQELTQAIFGEIPTYT
LVSESGPDHQKSFEIALSVNGVEYARAKGSSKKDAQQKSAQIAYEKISALYKNNHQNNDK
ER
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccaaagtataatcccccaaaaaacgctcaagcccttgaaaaaaaacttggttacact
tttaaagataaaaagctcctgcttgaagcccttacgcataaaagctgtaagaatgcctat
aataatgaacggctagagtttttgggtgatgcggtgcttgacttgcttgtgggggagttt
ttatttagaaaatttcctagtgctaaggagggtgagttaagcaagttgcgagcgtgtatt
gtcaatgaaaagggctttatgaaacttgcaaaatcgcttgatttgggagcatttttgcat
atctcacagagtgaagagcataataaagggcgagaaaaagcctctatcctttcaaatgcc
tttgaagccttgatgggtgcgatttatttagaatctgaactgacatttcttaaagatatt
gtgttaaaactcttagagcaaaattatgccaagattgatttacgctcactttttacagat
tataagactgctttgcaagagcttacacaagcgatttttggggagattccaacttatacg
cttgtgagtgaaagcggacctgatcatcaaaaaagctttgaaattgccctaagtgtcaat
ggggtggaatacgcaagggcaaaaggcagctcaaaaaaagatgcccagcaaaaatccgct
caaattgcttatgaaaaaatctctgccctatacaaaaataatcatcaaaacaatgataag
gagagatga

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