Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0171
Help
Entry
HCBAA847_0171 CDS
T02494
Symbol
nusA
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcb03021
]
HCBAA847_0171 (nusA)
03009 Ribosome biogenesis [BR:
hcb03009
]
HCBAA847_0171 (nusA)
Transcription machinery [BR:
hcb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HCBAA847_0171 (nusA)
Ribosome biogenesis [BR:
hcb03009
]
Prokaryotic type
rRNA transcription factors
HCBAA847_0171 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
KH_NusA_C
NusA_N
KH_2
KH_1
DNA_pol3_a_NII
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAM31426
UniProt:
A0AAI8MLH6
LinkDB
All DBs
Position
complement(183407..184603)
Genome browser
AA seq
398 aa
AA seq
DB search
MEKILDIIDLIAYDKGLDNGVVLEIVKNGLIKIAQEEINPLYHYIVEPDVKERILKLFYR
KKVCADDVKLTEEDLATSIPLSQAKEFGDVSVGDELDCELQLDEMSRGAINKLFLNLEYN
LQRSIEDQILQGFRAQLGKIVNGQVVGVDERGNTFVEIDSIRALLPQKNRIKGESFKVGD
TIRAVLKFVGINKNGLQVELSRTTPKFLEELLALEVPEIKDNEVMIFKSARIPGDRAKVA
VYSNNPRIDPIGCCVGVKGVRINAVSKELANENIDCVEYHSTLEIFIAKALTPAQILSVK
IQEQNIEQSERENMEGEKEKNERKKAIVLIKSDQKSKAIGKGGVNIRLASMLCDCDIELC
EIDTPNTGDSKADSNTTTPSENTAQKSGLDALSSLFKN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattttagatattattgatttaattgcgtatgacaaggggctagataatggc
gtggttttagagattgtcaaaaatggcttaatcaaaatcgcacaagaagagattaatccc
ctttatcactacattgttgagccagatgtaaaagagcggatattaaagcttttttaccgc
aaaaaagtctgtgctgatgatgtaaaactcacagaagaagatttagctacttcaatcccc
ttgtctcaagctaaggagtttggcgatgtgagtgtaggcgatgagctagattgtgaattg
cagcttgatgagatgagccgtggggcaatcaacaagctttttttgaatcttgaatacaat
ttgcaacgctccattgaagatcagattctacaaggctttcgcgcccaacttggcaaaatc
gtcaatgggcaggttgtgggtgttgatgagcgtggcaatacctttgtagaaatcgattct
atccgtgccctgctaccgcagaaaaatcgcataaagggcgagagtttcaaggttggcgat
accattcgtgcggtgctaaaatttgttggcattaacaaaaatgggctacaagtggagcta
tctcgcaccacgccaaaatttttagaagagcttttagcgttagaagtcccagagattaaa
gataatgaagtaatgatttttaaaagtgcgagaatccccggcgatagagcaaaggtagcg
gtatattccaataatcctagaattgatcctatcggttgctgtgtgggtgtaaagggtgtg
cggataaatgcagtcagcaaagagctagcaaatgaaaatattgactgcgtagaatatcac
agcacactagagatatttatcgctaaagccttgacgcctgctcaaatcctaagtgtaaaa
atacaagagcaaaatatagagcaaagtgagcgtgaaaatatggagggcgaaaaagagaaa
aatgaaagaaaaaaggctatcgtgctgatcaaaagcgatcaaaaaagcaaggctatcggc
aaggggggtgtgaacatccgccttgcaagtatgctatgtgattgcgatattgaactatgc
gagattgacacgccaaatacgggggattccaaagcagattctaataccacaactccaagt
gaaaacacggcacaaaaaagcggactagacgcccttagctcactctttaaaaattag
DBGET
integrated database retrieval system
