Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0273
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Entry
HCBAA847_0273 CDS
T02494
Name
(GenBank) ribosomal pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcb03009
]
HCBAA847_0273
Enzymes [BR:
hcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HCBAA847_0273
Ribosome biogenesis [BR:
hcb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HCBAA847_0273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ERCC4
Rua1_C
Motif
Other DBs
NCBI-ProteinID:
BAM31523
UniProt:
A0AAI8MKZ6
LinkDB
All DBs
Position
264413..265150
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AA seq
245 aa
AA seq
DB search
MPTDKAYKLLAKAKCISHNLAKSLIDKGLVSSNGKKITIARLELPLSANFEVAEIKKPKV
IFEDKQILALDKPPFIESYDLSDMFEGWSLLHRLDKQTSGVILLIQENSPFHLKAKEAFK
KQAVYKEYICLLHGILADSITINKPISTIKKGFAKSRIDKNGLSAHTQLTPLSIVGKKTQ
AQAIITTGRTHQIRVHCQSINHPIVGDTLYGNTNDNAKRLMLHAHKIRLLDYEFVSLLPQ
EFHIG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgacaaagcctataagctcctagccaaagccaagtgcatttctcataatctc
gctaagtctctcattgataaagggcttgtatcaagcaatggtaaaaaaatcactatcgca
aggctagaactgcccttgagtgcgaattttgaagtggcagagataaaaaagccaaaagtc
atttttgaagacaagcagattttagcccttgataagcccccatttatagaatcttatgat
ttaagcgatatgtttgaaggttggagcttactccacaggcttgataagcaaacaagcgga
gtaattttactcatacaagaaaatagcccctttcatctcaaagccaaagaagcctttaaa
aaacaggctgtctataaggaatacatctgcctactacacggaatcttagcagattctatt
accattaataagcccatatccacaataaaaaagggctttgccaagtctcgcattgataaa
aatgggctgtccgctcacacacagctaacccccctaagcattgttggcaaaaagacacaa
gcccaagccatcatcaccactggtcgcactcaccaaatccgtgtgcattgccagagtatc
aatcaccccattgtcggcgacacactctatggcaacacaaatgacaatgccaagcggcta
atgctccacgcacataaaattcgccttttagactatgagtttgtttccctactcccgcaa
gaatttcatataggctag
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