Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0348
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Entry
HCBAA847_0348 CDS
T02494
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_0348 (radA)
DNA repair and recombination proteins [BR:
hcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCBAA847_0348 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
AAA_22
ABC_tran
NTPase_1
AAA_24
nSTAND_NTPase5
Rad51
AAA
AAA_14
AAA_16
RsgA_GTPase
ATPase_2
SLFN-g3_helicase
DUF7129
nSTAND3
AAA_23
NACHT
Zeta_toxin
zf-C2H2_2nd_ZNF462
AAA_19
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAM31595
UniProt:
A0AAI8MKY0
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Position
complement(339134..340471)
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AA seq
445 aa
AA seq
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MAKKSVVFECQFCGWQSPKWLGKCSSCGSWDSLVELKGEMKKYSLASQNHNPTTHAIPIT
EVQFESIQHFTSYEEELDIVLGGGIVPGGLYLIGGSPGVGKSTLLLKIAGNLAEKSALKI
LYVSGEESAGQIKMRSTRLGAVSENLFLLNEIDLSSITQALNERKYSLCVIDSIQTIYSP
EITSAPGSVSQVREVTFALMRLAKERNISIFIIGHITKEGSIAGPRILEHMVDCVLYFEG
DPSKELRMLRGFKNRFGTTSEIGIFEMKECGLVSAKNASRLFFNQRSAQAGSAVAVLLEG
SRAIIIEIQALVSESAYPKRSCTGFDTNRLNMLLALLERKLDMPLGRYDVFVNVVGGIKI
SEPSADLAVIASIVSSFKNRPLSPKTAFVGEVSLVGDIREVSNIEIRLKELENYGFEKVI
LAKKPKNTTIKCFEANEVSKILEWM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaaaagtgtagtttttgaatgtcaattttgtggttggcaaagcccaaagtgg
cttggaaaatgtagcagttgcgggagttgggatagtttagttgagcttaaaggtgaaatg
aaaaaatatagccttgcaagtcaaaatcacaatcccacaacccacgctattcccattaca
gaagttcaatttgaatctattcagcatttcacttcctatgaagaagagcttgatattgtg
cttggtgggggcattgtgcccggtgggctataccttatcggtggcagtccgggtgttggc
aaatctacacttttattaaaaattgcaggaaatttagcagaaaaatcagcccttaagatt
ctctatgtgagtggggaagagagtgctgggcagattaaaatgcgttccactcggctgggt
gctgtaagtgaaaatctctttttgctcaatgaaattgatttaagtagcattacacaagct
ctaaatgagcggaaatacagcctatgcgtgatagattctatccaaacgatatattccccg
gaaatcacttccgcacccggtagtgtttcacaagtgcgtgaagttacctttgcacttatg
cggttagcaaaggagcgaaatatcagcatttttatcattgggcatatcacaaaggaaggc
tccattgccggacctagaatcttggagcatatggtagattgtgtgctgtattttgaaggt
gatccaagcaaagaactaagaatgctaaggggctttaaaaatcgctttggcacaacaagt
gaaattggaatttttgagatgaaagaatgtgggcttgtgagtgccaaaaacgcttcaagg
ctttttttcaatcagcgttcagcccaagctggaagtgctgtggctgtgctacttgagggg
agtagagctattatcattgagattcaagcccttgtgagtgaatctgcctatcctaaacgc
tcttgcacaggctttgatactaaccgcttgaatatgcttttagctcttttggagcgaaaa
cttgatatgccacttggacgatatgatgtatttgtcaatgtcgtaggtggcataaagata
agtgagccaagtgcggatttagccgttattgcaagtattgtctcaagctttaaaaatcgt
ccgcttagtcctaaaactgcctttgtgggcgaagtttcacttgtaggcgatatacgcgaa
gttagcaatattgagataaggctaaaagagctagaaaactatggatttgaaaaagttatc
cttgctaaaaagcccaaaaataccacaatcaaatgctttgaagcaaacgaggtaagcaag
attctagagtggatgtag
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