Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0549
Help
Entry
HCBAA847_0549 CDS
T02494
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb00900
Terpenoid backbone biosynthesis
hcb01100
Metabolic pathways
hcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HCBAA847_0549 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hcb01006
]
HCBAA847_0549 (ispA)
Enzymes [BR:
hcb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HCBAA847_0549 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HCBAA847_0549 (ispA)
Prenyltransferases [BR:
hcb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HCBAA847_0549 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5685
Motif
Other DBs
NCBI-ProteinID:
BAM31796
UniProt:
A0AAI8QFN9
LinkDB
All DBs
Position
complement(541367..542236)
Genome browser
AA seq
289 aa
AA seq
DB search
MQHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQL
VKNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAF
ALLAQARLDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAKL
IATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQDSSQAGKTTQNDSHKN
SYVNLLGLDGARAEFHRQRQNLQQELKSFESSIAQSLNTLLENYFQDIV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatcacagaaattttacacgattttgaatcttttcttttagcccaagccccg
cagattccaagctttcatcagcattatgaaaaagccgtgtgggaaatggtgcaaaatggc
ggcaaaagattccgccctgctcttgtttttagcgttcttaatgctcttgccccacagctt
gtaaaaaatgcctttcttccagctttaagcattgagtgtattcacacttattcgcttatc
cacgatgatttgccctgtatggataatgcctctttgcggcggggacaccctacattgcat
acaaagtatggagaaactctagccctacttgtaggcgatggactaaatacctatgccttt
gccttgctcgctcaagctaggcttgattcacaactcaaactcgctctcatagaatcttta
gccataaatgccgggattggcggaatggtgctagggcaaatgcttgattgtgagtttgaa
aatcaagctctagccctagagcaactccaaactatccatactaataaaaccgctaaactc
atcgccacttcattagagtttggcgctatcattgcaaatgcagattctaaactccgcaag
gctttgtatgactttggtttgaagcttggcgtatattttcagctccgcgatgacatcatt
gatatatgtcaagattcaagccaagcggggaaaacaacgcaaaatgacagccataaaaat
agctatgtcaatttgctaggcttagatggggcaagagcggagtttcatagacaaaggcaa
aacttgcaacaagagctaaaaagctttgaatctagcatagctcaaagcctaaacacgctt
ttagaaaactattttcaagacattgtataa
DBGET
integrated database retrieval system
