Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0699
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Entry
HCBAA847_0699 CDS
T02494
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcb03032
]
HCBAA847_0699 (gyrA)
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_0699 (gyrA)
Enzymes [BR:
hcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCBAA847_0699 (gyrA)
DNA replication proteins [BR:
hcb03032
]
Prokaryotic type
DNA Topoisomerases
HCBAA847_0699 (gyrA)
DNA repair and recombination proteins [BR:
hcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCBAA847_0699 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SPAM
Nitro_FeMo-Co
Nnf1
Motif
Other DBs
NCBI-ProteinID:
BAM31937
UniProt:
A0AAI8MI63
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All DBs
Position
676933..679407
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AA seq
824 aa
AA seq
DB search
MDSLLEDKSVEVKIDDSIKESYLDYSMSVIVGRALPDAKDGLKPVHRRILYAMNELSLSP
RRPYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDGAAA
MRYTEARMTSASEEMLRDIDKDTVEFVPNYDNTLSEPDVLPSRIPNLLVNGSSGIAVGMA
TSIPPHRIDEIIDALIFVIDNNTQNVDDVLELVQGPDFPTGGIIYGKMGILEAYRTGRGR
IRVRAKVHIEKTKTKDVIVIDEVPYQVNKAKLVEQISELAKEKIIEGIAEVRDESDREGI
RVVIELKRDAMSEIVLNHLFKSTTMESTFGIILLAINNKEPKIFNLLELLQIFIAHRKTI
IIRRSIFELEKAKARAHILEGLIIALDNIDEIIRIIRASKDTEEAKNALVEKFSLSELQA
KAILEMRLQRLTGLERDKINAEYAELQEQIAYLESILKSEEKLKSIVKDELLEIKEKFSS
KRKTQIEEDYDSIDIEDLIPNEKVVVTMSHRGYVKRVLLKTYEKQNRGGKGKVSGNTHED
DFIESFFVANTHDTIMFVTNKGQLYWLKVYKIPEAGRTAIGKAVVNLINLSPDEKIMATI
TTTDFNDDKSLVFFTKNGIVKRTNLKEYSNIRSVGVRAINLDENDELVTAHIVGSSVKEL
FIATQQGMCIRFGIDELREIGRVGRGVTGIKFKASEDCVIAATTITSDTDKLLTVSEQGI
GKQTLAGEYRLQSRAGKGVIVMKLTPKTGKLVSVVNINDENMDLMVLTSSGKMIRVDTEA
IREAGRNTSGVKIVNVGNDKGAYANVCPKEPKEDDEEEGFTPED
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggatagcctactagaagataaaagtgtggaagtaaagattgatgattctattaaggag
agttatcttgattattcaatgagtgttattgtggggcgggcattaccagatgctaaagat
ggactaaagccggtgcataggagaatcttatatgcaatgaatgagctaagcctctctccc
cgtcgcccttataagaaaagtgctaggattgttggcgatgtgattggtaaataccaccca
cacggcgatacagccgtgtatgatgcacttgtgcgtatggcacaggacttttctatgcga
cttgagcttgtagatgggcaggggaactttggctccattgatggtgatggtgcggcggct
atgcgttatactgaagcacgtatgacaagtgcgagtgaagaaatgctacgcgatattgat
aaggacacggtggagtttgtgccaaactatgataatacgctaagtgagccagatgtcctg
cctagtagaatcccaaatttgcttgtaaatggctcaagtggtattgctgtgggtatggcg
acttctatcccgccacaccgcattgatgagattattgacgcacttatttttgtgattgat
aacaacacgcaaaatgttgatgatgtgcttgaacttgtgcaaggaccggattttccaaca
ggtgggattatctatggcaagatgggaatcttagaggcttaccgcactgggcgaggtaga
atccgtgtgcgtgcaaaggtgcatattgaaaaaacaaagacaaaagatgtgattgtcatt
gatgaagtgccttatcaagtcaataaagccaagcttgtggagcaaatatccgaacttgct
aaagaaaagattatagaaggcattgcagaagtgcgagatgaaagcgatagggaagggata
cgcgtagtcattgagctaaaacgcgatgcgatgagcgaaatagtgcttaatcatcttttt
aaatccaccacaatggaaagcacctttggaatcatacttcttgcaattaataacaaagag
ccaaagatttttaatctccttgagctattgcagatttttattgctcatcgcaagacgatt
attatccgccgaagtatttttgagcttgaaaaggctaaggctagagcacatattttggag
ggcttaatcatagcccttgataatattgatgagattatccgcattattcgtgcgtcaaaa
gatacagaagaagcaaaaaatgcgttagtagagaagtttagtttaagtgagctacaagct
aaagccatacttgaaatgcgtttgcaacgcttgacagggttagagcgagataagattaat
gcggaatatgccgagttacaagaacaaatcgcatatttagaatctatccttaaaagtgaa
gaaaagctaaaaagtatcgtaaaagatgagcttttagagataaaagaaaagtttagctcc
aaacgcaaaacacagattgaagaggactatgacagcattgatatagaggatttaatccca
aatgaaaaagttgtggtaacaatgagtcatcgcggctatgtcaagcgagtgctacttaaa
acttatgaaaagcaaaatcgtggtggtaaaggtaaggttagcgggaatacgcacgaagat
gactttattgaatctttctttgtggcaaatacgcacgatacgattatgtttgttactaat
aaaggacagctctattggctcaaagtctataagattccagaagcgggtcgcacagccatt
ggcaaggcagttgtgaatcttattaatctctcccctgatgaaaagattatggcaactatc
acaacgactgattttaatgatgacaaatcgcttgtgtttttcactaaaaatggtattgtc
aaacgcacaaatctcaaagaatacagcaatatccgcagtgtgggggtaagggcgattaac
cttgatgagaatgatgagctagtaaccgcacatatcgtaggctcaagtgtcaaagagcta
tttatcgctacacagcagggtatgtgtatccgctttggtattgatgaattgcgagagatt
ggacgggtgggtcgcggggtaacgggcattaagtttaaggcaagtgaagattgcgtcatt
gcggcaacgacaatcacaagcgatacagataagcttttaaccgtgagtgagcagggcatt
ggtaagcaaacactggcaggagagtataggctacaatcgcgtgcaggtaagggtgtgatt
gtaatgaagcttactccaaaaacgggcaaacttgtgagtgtggtcaatatcaatgatgaa
aatatggatttaatggtgctgacaagctcgggcaaaatgatacgcgtagataccgaagcc
atacgcgaagcagggcgtaatacaagtggcgtgaaaattgtcaatgttgggaatgataaa
ggcgcttacgccaatgtctgccccaaagagccaaaagaagatgatgaagaagagggattt
acaccagaagattag
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