Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0867
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Entry
HCBAA847_0867 CDS
T02494
Name
(GenBank) oligopeptide ABC transporter
KO
K13896
microcin C transport system ATP-binding protein
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCBAA847_0867
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcb02000
]
HCBAA847_0867
Transporters [BR:
hcb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HCBAA847_0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
AAA_5
AAA_29
nSTAND1
nSTAND3
RsgA_GTPase
NACHT
oligo_HPY
AAA_7
Mg_chelatase
AAA_25
ABC_ATPase
Sigma54_activat
DUF87
DEAD
PRK
Roc
AAA_13
Motif
Other DBs
NCBI-ProteinID:
BAM32105
UniProt:
A0AAI8MLW2
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Position
833973..835556
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AA seq
527 aa
AA seq
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MLNISHLNAHFLHSTRFSLQDICLHIKPGEKVALVGESGSGKSMLAQLILNLNPHIALQS
GSVEFENKNLATLTQKELESLRGRDIAYIPQEPLSSLNPLHKVGKQIMESFYLHANELYP
NLKGKALHNKSKERLAELLALIGLDSSLAHAYPFELSGGQKQRVAIAMSIVNNPKLLICD
EPTTALDVLVQRQIMELLSSLAKQSAIVFISHDLGVVREFADRVVVLKEGKIIESALSEK
LFNAPQHSYTRFLIESLRLPKRKALTQTSQDFTQQDIVLRAKDLSVGVKKQGFFTSTYKQ
ILSPLSFCLKKGQILGIAGESGSGKSSLALGLLHLLETKGELYLNERQVKRTKADVKLLR
KQISMVFQDPFSSLCPRFRVGDIIKEALGKLPNEAYREKIAWALEMTGLDSSLAHAYPFE
LSGGQKQRVAIARAIVREPKILLLDEPTTALDKSSQKLILTLLLELQEKMQVSYIFITHD
LEILRELSDEVLILHKGVAVEYGRSENVFETPQSVEARALIEAFFGK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacatctctcatcttaatgctcattttctgcattctactcgttttagtttgcaa
gatatttgcttacacattaagcccggcgagaaagtggcgttagttggagaatctggctcg
ggtaagagtatgttagctcaacttattttgaatcttaatccgcatattgctttgcaaagt
ggtagtgtggagtttgagaataaaaatctagcgacactcacgcaaaaagagctagaatct
ctgcgtggcagggacattgcctatattccacaagagccgctttcaagccttaatcccctg
cataaagtcggcaaacaaataatggagagcttttatctccacgctaatgagctttacccc
aatcttaagggcaaggcgttacacaacaaatcaaaagagcgactagcagaacttttagca
ttaatcgggctagattctagcttggctcacgcttatccctttgaactaagcggggggcaa
aagcaacgcgtagccattgctatgagtattgtgaataatccaaaattgctgatttgtgat
gagcctacgactgccctagatgtgctggtgcagcggcaaattatggagctactctcaagc
ctagccaagcaaagtgcgattgtgtttattagccacgatttgggcgttgtgcgtgaattt
gccgatagggttgtggtgttaaaagaaggcaagattatagaatctgctttgagtgaaaag
ctttttaacgccccacagcattcctatacgcgatttttaattgaatctttaaggctccct
aaacgcaaagctctcacacaaacaagccaagattttacacaacaagacattgtgctaaga
gccaaggatttaagcgtgggggtaaaaaagcagggatttttcacaagcacttataagcag
attctatccccattaagcttttgcctgaaaaaagggcagattctaggaatcgccggggaa
tctggcagtggcaagtctagccttgccctagggcttttgcatttacttgagacaaaaggg
gagttatatcttaatgaaaggcaggttaaacgcacaaaggcagatgtgaagcttttgcga
aagcagatcagtatggtgtttcaagatcctttttcttcactctgcccgcggtttcgtgtt
ggcgatattattaaagaagctttgggaaagctccccaatgaagcatatagggaaaaaatc
gcgtgggcgttagaaatgacagggctagattctagcttggctcacgcttatccctttgaa
ctaagcggggggcaaaagcaacgcgtagctattgctagagccattgtaagagagcctaag
attttgttacttgatgagccaacaaccgcccttgataaaagctctcaaaagctcatactc
acgcttttattagaactacaagagaaaatgcaggtgagctatatatttatcacgcacgat
ttggagattttgcgagagttgagtgatgaagtgctgattttacacaagggcgtggcggtg
gaatatggcaggagtgagaatgtgtttgaaactccgcagagtgtggaggcaagggctttg
attgaagcattttttggtaaataa
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