Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1195
Help
Entry
HCBAA847_1195 CDS
T02494
Symbol
trmE
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcb03016
]
HCBAA847_1195 (trmE)
Transfer RNA biogenesis [BR:
hcb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCBAA847_1195 (trmE)
Prokaryotic type
Methyltransferases
HCBAA847_1195 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
Dynamin_N
FeoB_N
AIG1
RsgA_GTPase
GTP_EFTU
Roc
Ras
AAA_24
ABC_tran
AAA_15
ABC_ATPase
DUF1643
Motif
Other DBs
NCBI-ProteinID:
BAM32429
UniProt:
A0AAI8QH57
LinkDB
All DBs
Position
complement(1167118..1168515)
Genome browser
AA seq
465 aa
AA seq
DB search
MKNTSSSTILDDSTIVAIATPVGVGAISIVRLSGEFAYNIALKLTHRDSLKPRYAHLCQI
YDENTAIDEAIVLFFPKPHSYTTQDVCEVQCHGGISSAKGIVELCLRLGARLANAGEFTK
RAFLGGRLDLAQTHAIAGIIQSQSLEANKILMRQLKGELSGFVKTNREKLLTLLAFSEVN
IDYSEEVEQDYITQMQDSLQELESCFKHIYEASIMRLGVIEGYTLSIVGKPNVGKSSLLN
ALLMYERAIVSDVEGTTRDTIEESLQIEGVIVRIVDTAGIRQSPDAIEQIGIAKTKEALD
RSDVIIALFDSSRAFDEKDREILDLLATHTDKHILLVLTKSDLPLAFDTKYLSEFVAQNP
NVLQESPLYISIESGGAKAVIEALKSVINTHSGGDGLILTSHYQLKSLKDVLDSITKAYD
VLNLGELELFSYHIRDCITALSNITHPYEDSQLLDKLFGTFCLGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatcatcatcaacgattttagacgatagcaccattgttgctattgccaca
cctgtaggggttggggcgattagcattgtgcgattaagtggggagtttgcctataatatc
gccttaaaactcacacatagagattcccttaagccacgctatgcccatttatgccaaatc
tatgatgaaaatactgctattgatgaagccattgtgctatttttcccaaagccacatagc
tacacgacacaagatgtttgcgaggtgcagtgccacggcggaataagcagtgccaaaggt
atagtagagctttgcttaaggcttggagcgagacttgcaaatgcgggtgaatttaccaaa
cgcgcctttttgggcggacgcctagatttagctcaaactcacgccattgctggaatcata
caatcccaaagccttgaagcaaacaagattctaatgcgacagcttaagggggagctaagt
ggatttgtgaagacaaatcgcgaaaagctcttaacccttctagcctttagtgaagtgaat
attgattatagcgaggaagtggagcaggattatattacacaaatgcaagattctttgcag
gagctagaatcttgctttaagcacatatatgaagcctccattatgcgacttggtgtgatt
gaaggctatacgcttagcattgtaggcaaaccaaatgtcggtaaaagctcattgcttaat
gccctgcttatgtatgaacgagccattgtgagtgatgtggaggggactacgcgtgatacg
attgaagagagtttgcagatagaaggtgtaatcgtgcgaattgtggataccgctgggata
cgccaaagccctgatgcaatagaacaaatcggtattgccaaaacaaaagaggctttagat
agaagcgatgtgattatcgcactttttgatagctcaagggcgtttgatgaaaaggataga
gagattttagatttacttgccacacatacagataagcatattttgcttgttttgacaaag
agcgatttgcccttagcctttgataccaagtatttaagcgagtttgtggcacaaaatcct
aatgttttgcaggaaagccctttatatatcagtatagaatctggcggggcaaaggcagtc
atagaagcgttaaaaagtgtcataaacacgcatagtgggggtgatggccttatcctcact
tcacattatcagctgaaaagcttgaaagatgtgctagattctatcactaaagcttatgat
gtgctaaatcttggtgagctagagctcttctcatatcatatacgcgactgcattaccgcc
ctttcaaatatcactcacccctatgaagattcgcaactccttgataagctttttgggaca
ttctgcctaggcaaataa
DBGET
integrated database retrieval system
