Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1206
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Entry
HCBAA847_1206 CDS
T02494
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcb03016
]
HCBAA847_1206 (truB)
Enzymes [BR:
hcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HCBAA847_1206 (truB)
Transfer RNA biogenesis [BR:
hcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HCBAA847_1206 (truB)
Prokaryotic type
HCBAA847_1206 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
BAM32440
UniProt:
A0AAI8MMU4
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All DBs
Position
complement(1177402..1178232)
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AA seq
276 aa
AA seq
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MESLLVAAYKPPFISSNVYLGRLKRHFGIKKGGYLGTLDPFAQGVLVVGFGSYTRLFPHL
QKTPKVYRATLWLGAKSLSLDIEHITLVECVKEQSKAHISEILESLRGTLSYTPPKFSAR
HINGKRAYELARRGEEFELSQTQMTIYDIKLLHYNHPFLHFEVSVSEGAYVRSIGAMITE
NLGVNGVLSHLERTSEGEMSVSQTQGLKILNPIEFLPYKRLENMQKFYDDMCCGKKILLK
NTEKGKYIVCFDDFFSIIQVLSDGSVEYIVNRIELC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttggaatctttgcttgtggcggcatataaaccaccttttatcagctcaaatgtgtatctt
gggcgattaaaaaggcattttggtataaaaaaaggtggctatttaggcacacttgatcca
tttgctcaaggtgtacttgtggtgggttttgggagctatacgcggctttttccacatttg
caaaaaacgcctaaagtgtatagggcgactttgtggcttggggcaaaatcattaagccta
gatattgaacatatcactttggttgaatgtgtaaaagagcagagcaaggctcatatcagc
gagattctagaatcactgcggggcactttgagctacactccgccaaaatttagcgcaagg
catattaatggtaaaagggcttatgagcttgcaaggaggggcgaagagtttgaactctca
caaacacaaatgacaatttatgatataaagctactgcattataatcacccatttttgcat
tttgaagtgagtgtgagtgagggggcgtatgtgcggagtattggagcgatgataacagaa
aatcttggggtgaatggggtattatcacatctagagcgtacgagtgagggggaaatgagt
gtgagccaaactcaaggattaaagattctaaatcccattgagtttttgccctataagaga
ctagaaaatatgcaaaaattttatgatgatatgtgttgtggtaaaaagattttgctaaaa
aatacagaaaaaggcaaatatatagtgtgttttgatgattttttctctataattcaagtt
ttgagtgatggtagcgtagaatatattgtgaataggattgagttatgttaa
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