KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1423
Entry
HCBAA847_1423     CDS       T02494                                 
Symbol
csn1
Name
(GenBank) CRISPR-associated protein
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcb02048]
    HCBAA847_1423 (csn1)
Prokaryotic defense system [BR:hcb02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    HCBAA847_1423 (csn1)
SSDB
Motif
Pfam: CjCas9_PI_CTD HNH_4 CjCas9_WED-like RuvC_III Cas9_RuvC Cas9-BH YecR
Other DBs
NCBI-ProteinID: BAM32653
UniProt: A0AAI8QHE5
LinkDB
Position
complement(1366093..1369164)
AA seq 1023 aa
MKIYSFDIGVASIGWAFIENEVLQDCGIRIFTKAENPKNGASLALPRREARGVRKRLARR
RGRLNTIKQLLCKEFGLQLEDYLSNDGELPKAYTASKANPLKSPYELRTLALSQKLDSKD
LVRVILHIAKHRGYGNKHAKDSKDTESGKVKKAIEFNRKTLAEKGYRSVGEYLYREFFQQ
SRISQNNGATEFINVRNKAGNYEHCVAQDMLKEELESILNAQRQFGFSLKQDFESKLLTK
IFEQRPLKSFADKVGNCCFIAGEKRAPKDSPSAIEFIALSRTINTLINLSKESGEIYNRA
IILQIVESTLKKGEISYKELREIIRLDERLRFKDPRLDYSREIKEAEKVKFLEFKQLKGF
KKALGESFTTLAISQLDEIAEHIALIKDRVKLNEKLESYALTKEQREALSNLSFSAHINL
SLQALKQILPFMRGDNGEQCLDYDESVEKAGLKALSKDTLKGQMLPPLNEFEPYLSNPVV
ARALAEYRKVLNVLLKQYGSPHKIHIEYAREAKLSSTERQKYEKEQKDNYAANQAAHKKC
QELGLEPSSTNLLKLKLWQEQGGLCLYSGAKITISYLQDPTALQVDHIYPYSRSFDDSYM
NKCLVLTKANQEKGNRTPFEAFGTDSAKWGVITTLAQKLPHKKRRRILNTAFNDKEAGFK
LRNLNDTSYIARLVADYTETYLEFLPLVESENTTLSKGQKGSKKHIAIVNGVLTSTMRYY
LGFASKDRDNHLHHALDAVIIGFMNDSVIKAFSDFKKTQETSKAAYYAHTLSKQEYKKQR
AFIQLPSGENFRVSVLEKVESVFVSKPPRKRVRGALHEATFYSPNDPKLLKNYGGTKGVE
RALALGKMRKVGAKIVSNGAMVRVDIFRHKSSGKFYGVPVYTMDFALGILPNKAVVVGKD
QNGVIKDWLEMDSSYEFIFSLYKDDVILVQKKEMQRPELCYFVSFDTSGASIKVAKHDNN
FSTLTENQKLLFSNATKEEVVGKSIGIQNLKVFEKWQVSVLGEVKRTQSYPRENISLASK
AKK
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgaaaatatatagctttgacatcggtgtagcgagcattggctgggcgtttatagaaaat
gaagtgctacaagattgtggtattagaatctttaccaaagcagaaaatccaaaaaatgga
gcctccctagctttgcctaggcgagaggcacgaggagtgcgaaaaagattagctaggagg
agagggagattaaacaccataaaacaattactttgtaaagaatttggattgcaattagaa
gattatttgagtaatgatggtgaattgccaaaagcctacactgcttctaaagctaaccct
ttgaaatccccttatgagctacgcacacttgccctaagtcaaaagctagattctaaagat
ttggtgcgtgtgattttacacattgcaaagcaccgtggctatggtaataaacacgccaaa
gacagcaaagacacagaatctggcaaggttaaaaaggcaatagaatttaatcgcaagact
ctagcagaaaagggttataggagtgttggagaatatctatatagagaatttttccaacaa
agcagaatctcacaaaataacggtgcaacagaatttatcaatgtgcgaaacaaggctgga
aattacgagcattgcgtagcacaagatatgctaaaagaggaacttgagagcatattgaat
gcacaaaggcagtttggattcagtttaaaacaagattttgaaagtaaattgctaacaaag
atttttgaacaacgcccattaaaaagctttgctgataaagttggaaattgctgtttcatc
gctggggaaaaacgcgcaccaaaagactcgcctagtgcaatagagtttatcgctctatct
cgcactatcaatactcttataaatctctcaaaagaaagtggtgaaatatacaatagagcg
ataattttacaaatcgtagaatccacactcaaaaagggcgaaataagctacaaagagcta
cgagaaataataagactagatgagcgtttaagatttaaagatcctagactagattatagt
agagagataaaagaagcagaaaaggtaaaattcttagaatttaaacaattgaaaggattc
aaaaaagccctaggagagagttttaccacacttgcaatatcacagctagatgagatagca
gagcatattgcattgattaaagatcgtgtgaaattaaacgagaagctagaatcttatgcg
ctcacaaaagagcaaagagaagccttaagtaatcttagcttttctgcacatatcaatcta
agccttcaagccttgaaacagattctaccctttatgcgtggagataatggagagcagtgc
ttggactatgatgagtctgtagaaaaagcagggttaaaagctctaagcaaagatacttta
aaagggcagatgctcccaccgcttaatgagtttgaaccatatctctcaaaccccgttgta
gcaagggcattagccgagtatagaaaggtgttaaacgtgctgcttaagcaatatggtagc
ccccataaaatccacatagaatacgccagagaagccaagctaagtagcacagagcgacaa
aagtatgaaaaagagcagaaagataattacgccgctaatcaagctgcccacaagaaatgc
caagagttagggcttgagccaagtagcaccaatctcttaaagctaaagctttggcaagag
caaggagggttgtgtctatatagtggggcaaaaatcacaatctcctacttgcaagatccc
accgcattgcaagtggatcatatctatccctactcgcgtagctttgatgatagctatatg
aataagtgtctagtccttacaaaagcaaaccaagaaaagggcaaccgcacgccttttgaa
gcctttggaacagactctgccaagtggggagttatcacaaccctagcccaaaagctccca
cacaaaaaacgccgtagaatcctaaacacagcctttaacgataaggaagcaggatttaag
ctccgtaaccttaatgacacaagctatatcgcacgccttgtagcagattatactgaaaca
tatttggagtttttgcccctagttgagagtgagaacaccacgcttagcaaagggcaaaag
gggagcaaaaagcacattgccattgtcaatggtgtgcttactagcacgatgagatattat
ctaggctttgctagcaaagatagggataatcacttacaccacgctcttgatgcggtgatt
attggctttatgaatgatagtgtgataaaggcttttagcgatttcaaaaagacgcaagag
acaagcaaagccgcctactatgcccacactctaagtaagcaggagtataaaaaacaacga
gcttttatccaactcccaagcggcgaaaatttccgcgtaagcgtgctagaaaaagtagaa
tctgtctttgtttccaaaccaccaagaaaaagagtgagaggggcattgcacgaggctacc
ttctactcgccaaatgaccccaaactgcttaaaaactatggtgggacaaagggcgtggaa
agggcattagccctaggtaagatgagaaaagttggcgcaaagattgtaagcaatggcgcg
atggtgcgggtggatatttttagacataaaagtagcgggaaattctacggcgtgcctgtt
tatacaatggacttcgcgctagggattttgccaaataaggcagtagttgttggcaaggat
caaaatggtgtgattaaagattggctagagatggattctagctatgaatttatattttca
ctctataaagatgatgtgatcttagtgcagaaaaaggagatgcaaagaccagagctatgc
tactttgtgagttttgatactagtggtgcgagcatcaaagtagcaaaacacgataataac
ttctccacactcacagagaatcaaaaactccttttcagcaatgctacaaaagaggaagtg
gtgggtaaaagcattggaatccaaaatctcaaagtttttgaaaaatggcaagtctcagtt
ttaggtgaagtaaaacgcacacaatcatacccacgcgaaaacatatctcttgcctctaaa
gcaaagaaataa

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