KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1443
Entry
HCBAA847_1443     CDS       T02494                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HCBAA847_1443
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcb02044]
    HCBAA847_1443
Secretion system [BR:hcb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HCBAA847_1443
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Prok-TraM Toast_rack_N DUF2345
Other DBs
NCBI-ProteinID: BAM32673
UniProt: A0AAI8MN75
LinkDB
Position
1400138..1403098
AA seq 986 aa
MSYLQLSIDSLSFTITKAHIKESLESLWRIECEGYIESLEEHPFTLDFFNSSRKDQGNTF
NSFPHKESTLNFHPNALINKQATFKISNPYPQSHSTSHTLDFINNALPSTLESLKDTIKS
AKNKNKDTHHNQTSKDSKNSQESLDSLGRIKEYQGILCFVEYLGLNTQSSANVFHRGNLT
PSLNHKHFFKLTLCSSLYRMSLNKANRIYTNKSVIEAIHSTLNFYTHDLIKPLDFSGIAL
HYPKLELISQYEESDLDFITRLAHNNGIYFCDVRGSICFYDSAQRHSSREITFNPNVNNT
LNEPCISSVSKLQSLRAHTFSQSSQNALNPFSLESLSLKSDSLLQEGEQNNFTHSLHINE
HHYSNESSFTQSSDLKTPITLKEKRLRVIEQSLNAQSNIYDLTLNESITLNFSSSLKENK
ESLRDFIIIGMEQELINESLLENNFNSNDNAIKKENAKHLKESVTSLMNTEQINKGNESF
NPLTQNTSNALESLSSPSSLGKSHSYSNTLTLLPITFSYTPSLKSKPKAPSSTLGVVIGE
SEDIDGERNTIHTDNFGRVKVRINCFASQEVIDNARVKEQNNVQGKNIENNHSQGTLQNI
NGNTNTHTQTTNDTLSNTTQTEENIHSQENHTTNNDVENNHSQMKAYSYHYSPYLRVSSP
IASISSGLYHTPRVGDEVIVSFFDEDIDKPYISASLYNQSNPALPPLPLNAHQTSLSART
LNNTKETEDTNSSIVESGLNEITLSNIKEKEQIYLQAQRDYEELIKHNFTQKIQNNKDSI
VEGAYNERIKKIHTQTIDLAKIVSIGGEYNTNVALSKDTIVGLSHTLNVGASNKLRVAKD
SSEYVGEDKSVEIQANLNTSIKQDENRNVGGNKREIIQGSLDIQSGRECNLSTQSQMNFN
AKDNILFFGKESASFETQKELSFIADNTDMESKSNLTATAGNQILHQVGDTSITAKGDCV
IIKAGGVEVVIDSKGLIVKGGEIKAE
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgtcttatctacaactgagtatagattccctctcttttactatcactaaagcccatatt
aaagaaagtttagaatccttatggagaattgagtgtgaaggatatatagaaagcttagaa
gagcatccttttactttagactttttcaactcttcaaggaaagaccaagggaacactttt
aactctttcccacataaggagagcactttaaactttcaccccaatgctttaattaacaag
caagcaacctttaaaatcagcaatccctatcctcaatcacactctacttctcacacttta
gattttataaacaatgccctaccctctactttagaatctcttaaagatactatcaagagt
gctaagaataaaaacaaagacactcatcataatcaaacaagtaaagattctaaaaactct
caagaatctttagattctttagggaggataaaagaatatcaaggcatactctgctttgta
gagtatctaggattaaatactcaaagtagtgcaaatgtgtttcatagaggtaatcttacc
ccctctttaaatcataagcatttctttaagcttactctttgctcttctctttatagaatg
tctttaaataaagcaaatagaatctataccaataagagtgttatagaagccatacattct
acactcaacttttatacacacgatttaatcaaacctttggatttctctgggattgcttta
cactatccaaagttagaacttatttctcaatatgaggagagtgatttagacttcatcaca
agattagcccataataatggcatatacttttgtgatgtgagagggagtatatgcttttat
gatagcgcacaaagacactctagtagagagattacttttaatcctaatgtgaataacact
ttaaatgaaccttgtatctctagtgtctctaaacttcaatctttaagagctcatactttt
agccaaagtagccagaatgctctcaatcctttttcattagaaagtttaagtctaaagagt
gattccttattacaagaaggagagcagaataatttcacacactctttacatataaatgag
catcactatagcaatgaatcctcctttactcaaagcagtgatttaaaaactcccattact
ttaaaagaaaaaagattaagagtgattgaacaaagtctcaatgcacagagtaatatctat
gatttaactttaaatgaaagtattactttaaacttctcctcaagtttaaaagaaaacaaa
gagagtttaagagattttataattataggaatggagcaagaacttattaatgaatcttta
ttagagaataactttaattctaatgataatgccattaaaaaagagaatgcaaaacattta
aaagaaagtgttacttctttaatgaatacagagcagataaacaaagggaatgaaagcttt
aatcccctcactcaaaatacttctaatgctttagaatctctttcttctccttcttcttta
ggtaaatctcactcttatagtaataccctcacccttttacctattacctttagctatact
ccctctttaaagagtaagcctaaagctcctagtagcactttaggagttgttattggagag
agtgaggatatagatggagaaagaaatactattcatacagataactttggtagagtaaag
gtccgaataaattgctttgcttctcaagaggttatagataatgcaagagtgaaagaacaa
aataatgttcaaggaaaaaatatagagaataaccattcacaaggcactcttcaaaacatt
aatggaaatactaacactcatacacaaacaaccaatgatactttaagcaatacaacacag
acagaggagaatatacactcacaagaaaatcatacaacaaacaatgatgtagagaataac
cattcacaaatgaaagcctactcttatcattactctccttatcttagagtaagctctcct
attgcaagtataagttcaggtttgtatcatactccaagagtgggagatgaagtgattgta
agtttctttgatgaggatatagataagccttatatcagtgctagtctgtataaccaaagt
aatcctgccttgcctcctttgcctttaaatgctcatcaaacaagtttaagtgcaagaact
cttaataatacaaaagagacagaggatacaaactcttctatagtagaatctggattaaat
gaaatcacgctctctaatataaaagagaaagaacaaatctatcttcaagcacaaagagat
tatgaagaactcattaaacataacttcactcaaaagatacagaataataaagattccata
gtagagggagcatataatgaaaggattaaaaagattcatacgcaaaccatagatttagca
aagattgtaagtattggaggagaatataatacgaatgtggctttatctaaagataccatt
gtaggattaagtcatactttaaatgtaggagcaagtaataaacttagagtagctaaggat
agtagtgagtatgtaggagaggataagagtgtggagatacaagcaaacctcaatacaagt
attaagcaagatgagaataggaatgtaggggggaataagagggaaatcatacaagggagt
ttagatatacaaagtgggagagaatgtaatctctctacccaatcccaaatgaattttaat
gctaaagataatatcttattctttggtaaagaatctgcctcgtttgaaacacaaaaagaa
ctttcttttattgcagataatactgatatggaatctaagagtaatcttactgccacagca
ggaaatcaaatccttcaccaagtaggagacacttctattactgctaagggagattgtgtt
attattaaagctggtggagtagaagtagtcatagattctaaaggacttatagttaaaggt
ggggagataaaggcggagtga

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