KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1516
Entry
HCBAA847_1516     CDS       T02494                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HCBAA847_1516
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcb02044]
    HCBAA847_1516
Secretion system [BR:hcb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HCBAA847_1516
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Prok-TraM Toast_rack_N DUF3540
Other DBs
NCBI-ProteinID: BAM32746
UniProt: A0AAI8MP08
LinkDB
Position
1466014..1468974
AA seq 986 aa
MSYLQLSIDSLSFTITKAHIKESLESLWRIECEGYIESLEEHPFTLDFFNSSRKDQENTF
NSFPHKESTLNFHPNALINKQATFKISNPYPQSHSTSHTLDFINNALPSTLESLKDTIKS
AKNKNKDTHHNQTSKDSKNSQESLDSLGRIKEYQGILCFVEYLGLNTQSSANVFHRGNLT
PSLNHKHFFKLTLCSSLYRMSLNKANRIYTNKSVIEAIHSTLNFYTHDLIKPLDFSGIAL
HYPKLELISQYEESDLDFITRLAHNNGIYFCDVRGSICFYDSAQRHSSREITFNPNVNNT
LNEPCISSVSKLQSLRAHTFSQSSQNALNPFSLESLSLKSDSLLQEGEQNNFTHSLHINE
HHYSNESSFTQSSDLKTPITLKEKRLRVIEQSLNAQSNIYDLTLNESITLNFSSSLKENK
ESLRDFIIIGMEQELINESLLENNFNSNDNAIKKENAKHLKESVTSLMNTEQINKGNESF
NPLTQNTSNALESLSSPSSLGKSHSYSNTLTLLPITFSYTPSLKSKPKAPSSTLGVVIGE
SEDIDGERNTIHTDNFGRVKVRINCFASQEVIDNARVKEQNNAQGKNIENNHSQGTLQNI
NGNTNTHTQTTNDTLSNTTQTEENIHSQENHTTNNDVENNHSQMKAYSYHYSPYLRVSSP
IASISSGLYHTPRVGDEVIVSFFDEDIDKPYISASLYNQSNPALPPLPLNAHQTSLSART
LNNTKETEDTNSSIVESGLNEITLSNIKEKEQIYLQAQRDYEELIKHNFTQKIQNNKDSI
VEGAYNERIKKIHTQTIDLAKIVSIGGEYNTNVALSKDTIVGLSHTLNVGASNKLRVSKD
SSEYVGEDKSVEIQANLNTSIKQDENRNVGGNKREVVEGDSDISINQKLNIQTQGEIAIH
SNENIHLSSPQSLSLESETAAIMVADNVTMIADSNYTLNANTEAITQVGETTITATSDSV
IIKAGGVEVVIDSKGLIVKGGEIKAE
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgtcttatctacaactgagtatagattccctctcttttactatcactaaagcccatatt
aaagaaagtttagaatccttatggagaattgagtgtgaaggatatatagaaagcttagaa
gagcatccttttactttagactttttcaactcttcaaggaaagaccaagagaacactttt
aactctttcccacataaggagagcactttaaactttcaccccaatgctttaattaacaag
caagcaacctttaaaatcagcaatccctatcctcaatcacactctacttctcacacttta
gattttataaacaatgccctaccctctactttagaatctcttaaagatactatcaagagt
gctaagaataaaaacaaagacactcatcataatcaaacaagtaaagattctaaaaactct
caagaatctttagattctttagggaggataaaagaatatcaaggcatactctgctttgta
gagtatctaggattaaatactcaaagtagtgcaaatgtgtttcatagaggtaatcttacc
ccctctttaaatcataagcatttctttaagcttactctttgctcttctctttatagaatg
tctttaaataaagcaaatagaatctataccaataagagtgttatagaagccatacattct
acactcaacttttatacacacgatttaatcaaacctttggatttctctgggattgcttta
cactatccaaagttagaacttatttctcaatatgaggagagtgatttagacttcatcaca
agattagcccataataatggcatatacttttgtgatgtgagagggagtatatgcttttat
gatagcgcacaaagacactctagtagagagattacttttaatcctaatgtgaataacact
ttaaatgaaccttgtatctctagtgtctctaaacttcaatctttaagagctcatactttt
agccaaagtagccagaatgctctcaatcctttttcattagaaagtttaagtctaaagagt
gattccttattacaagaaggagagcagaataatttcacacactctttacatataaatgag
catcactatagcaatgaatcctcctttactcaaagcagtgatttaaaaactcccattact
ttaaaagaaaaaagattaagagtgattgaacaaagtctcaatgcacagagtaatatctat
gatttaactttaaatgaaagtattactttaaacttctcctcaagtttaaaagaaaacaaa
gagagtttaagagattttataattataggaatggagcaagaacttattaatgaatcttta
ttagagaataactttaattctaatgataatgccattaaaaaagagaatgcaaaacattta
aaagaaagtgttacttctttaatgaatacagagcagataaacaaagggaatgaaagcttt
aatcccctcactcaaaatacttctaatgctttagaatctctttcttctccttcttcttta
ggtaaatctcactcttatagtaataccctcacccttttacctattacctttagctatact
ccctctttaaagagtaagcctaaagctcctagtagcactttaggagttgttattggagag
agtgaggatatagatggagaaagaaatactattcatacagataactttggtagagtaaag
gtccgaataaattgctttgcttctcaagaggttatagataatgcaagagtgaaagaacaa
aataatgctcaaggaaaaaatatagagaataaccattcacaaggcactcttcaaaacatt
aatggaaatactaacactcatacacaaacaaccaatgatactttaagcaatacaacacag
acagaggagaatatacactcacaagaaaatcatacaacaaacaatgatgtagagaataac
cattcacaaatgaaagcctactcttatcattactctccttatcttagagtaagctctcct
attgcaagtataagttcaggtttgtatcatactccaagagtgggagatgaagtgattgta
agtttctttgatgaggatatagataagccttatatcagtgctagtctgtataaccaaagt
aatcctgccttgcctcctttgcctttaaatgctcatcaaacaagtttaagtgcaagaact
cttaataatacaaaagagacagaggatacaaactcttctatagtagaatctggattaaat
gaaatcacgctctctaatataaaagagaaagaacaaatctatcttcaagcacaaagagat
tatgaagaactcattaaacataacttcactcaaaagatacagaataataaagattccata
gtagagggagcatataatgaaaggattaaaaagattcatacgcaaaccatagatttagca
aagattgtaagtattggaggagaatataatacgaatgtggctttatctaaagataccatt
gtaggattaagtcatactttaaatgtaggagcaagtaataaacttagagtatctaaggat
agtagtgagtatgtaggagaggataagagtgtagagatacaagcaaacctcaatacaagt
attaagcaagatgagaataggaatgtaggggggaataagagagaggtggtggagggagat
agcgatataagtatcaatcaaaaacttaatatccaaacacaaggcgaaattgctatccac
tccaatgaaaatattcatctatcctcaccacaatctttaagtttagaatctgaaactgct
gctataatggttgctgataatgtaacaatgatagcagattctaattatactcttaatgct
aatactgaagccataacacaagtaggcgaaaccaccataaccgctacttcagattctgtt
attattaaagctggtggagtagaagtagtcatagattctaaaggacttatagttaaaggt
ggggagataaaggcggagtga

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