Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2037
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Entry
HCBAA847_2037 CDS
T02494
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcb03032
]
HCBAA847_2037
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_2037
Enzymes [BR:
hcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HCBAA847_2037
DNA replication proteins [BR:
hcb03032
]
Prokaryotic type
DNA Topoisomerases
HCBAA847_2037
DNA repair and recombination proteins [BR:
hcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCBAA847_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
FANCA_helical
Motif
Other DBs
NCBI-ProteinID:
BAM33255
UniProt:
A0AAI8QHX1
LinkDB
All DBs
Position
complement(1913704..1915602)
Genome browser
AA seq
632 aa
AA seq
DB search
MPLIIIESPNKVEKIKKITGYEVIATIGHFMDLKSFDIDKDYKPNFEYAESKKKRIMNAI
QKAKGQEVYIASDPDREGYSIGYMFFEKIKNVASKIYRAEFHEITPSGIKQGLENAKLFV
DTNFNYYQSFLARRVSDQLIGFLLSPYLTKSLQYNKMLSAGRVQTPALGLITKREQEIKD
FAALSEEQKQEFGIVANANIDNKLISFKHISDDLKELRFQTQQEAQNVCDEIASMDKALI
DKIEINNTSSKPAKPFTTSKLLKAASKTLSLPTKDIQNLAQELFAAGLITYIRTDSEYIS
PEFLKEMQSFYVSIYPNTYQYTEYKAGKNSQAEAHEAIRITHCHRFEECESLCQKENLKD
NHIALYKLIFQNTILSQSKPAIYETMNVTLRVKMKMFKTSFKKLIDEGYLGVFGKNEAIN
ENGDSENDESEESLHSFPYKQGDMIALQDISIKSIKKSAPKRYLEADFIEVMEKSAIGRP
STYATFLPLLLNKEYIEISKDKKREIIPTTLGMSVTQFFSKDNNAWLLDIAFTRDMENEL
DEIANSSKKYLDFMKTIHSKMNFMPLKAESKEKKDYPPSEKQIKFCKDISTTLNIPLPDG
LEKDYRIARKFIDENASKMPKKENKGNPNEKN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttatcatcatagaatcacccaacaaagtagaaaagattaaaaaaatcacaggc
tatgaagtcatagctaccataggacattttatggacttaaaaagctttgatattgacaaa
gactataagccaaactttgaatatgcagaatctaaaaagaaacgcataatgaatgctatc
caaaaagctaaaggacaagaagtgtatatcgcctctgaccctgatagagagggatattcc
ataggctatatgttttttgagaaaatcaaaaatgtagcaagtaaaatctatcgtgcagaa
tttcacgagatcacaccaagtggcataaagcaagggcttgagaatgctaaattatttgta
gatacaaattttaattattatcaatcattccttgctcgtagggtgtctgaccaactcata
ggtttccttttaagcccatatcttacaaaatccttgcaatataataaaatgctaagtgct
ggtagagtgcaaacccctgctcttggacttatcacaaaaagagagcaagagattaaagac
tttgctgccttaagtgaagagcaaaaacaagaatttggtattgtagctaatgctaatatt
gataataagcttattagctttaaacatataagcgatgatttaaaagaattgcgattccaa
acgcaacaagaggcgcaaaatgtgtgtgatgaaattgcctctatggataaggctttgatt
gataagattgaaataaacaatacttcaagcaaacctgcaaaaccttttacaacaagtaaa
ttgcttaaagctgcaagtaaaaccctatctctccccacaaaagacattcaaaatctagcc
caagagctatttgcagcaggacttataacttatatccgcacagattctgaatacatctct
cctgagtttttaaaagaaatgcaaagcttttatgtaagcatataccctaacacatatcaa
tacacagagtataaagcaggtaaaaactctcaagcagaagcacacgaagctataagaatc
acacattgccaccgctttgaagaatgtgagagcttgtgtcaaaaggagaatctaaaagat
aatcatatcgccctttataagctcatctttcaaaacactatcctttcacaatctaaacct
gccatttatgaaacaatgaatgtaacactacgtgtaaagatgaaaatgtttaaaacaagt
ttcaaaaaacttattgatgaaggctatttgggcgtatttggtaaaaatgaagctatcaat
gaaaatggggatagcgagaatgatgagagtgaagaatctcttcattcattcccttacaag
caaggcgatatgatagctttgcaagatataagcattaaaagcattaagaaatccgctcca
aaacgctatttagaagcagacttcatagaagtaatggaaaaatcagccataggcagacca
agcacctatgcgacatttttaccattattacttaataaggaatatattgaaatcagcaag
gataagaaaagagagattattcctacaacactaggaatgtcagtaactcaattcttttca
aaggataataatgcgtggcttttagatattgcctttacaagagatatggaaaatgagctt
gatgaaattgcaaatagctcaaagaagtatcttgattttatgaaaaccattcattcaaaa
atgaattttatgcccctaaaagcagaatccaaagagaaaaaagactatcccccaagtgaa
aagcaaataaaattttgtaaagacatatccaccacccttaatatcccattgcctgatggg
cttgaaaaggattatcgcattgcaaggaagtttatagacgagaatgcttcaaaaatgcca
aagaaagaaaacaaaggaaatccaaatgaaaagaactaa
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