KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2101
Entry
HCBAA847_2101     CDS       T02494                                 
Name
(GenBank) conserved hypothetical protein
  KO
K12684  serine protease autotransporter [EC:3.4.21.-]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hcb02000]
    HCBAA847_2101
   02044 Secretion system [BR:hcb02044]
    HCBAA847_2101
Transporters [BR:hcb02000]
 Other transporters
  Pores ion channels [TC:1]
   HCBAA847_2101
Secretion system [BR:hcb02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   HCBAA847_2101
SSDB
Motif
Pfam: Peptidase_S6 Beta-sol_PIC_HAP1_IgA0_2nd
Other DBs
NCBI-ProteinID: BAM33318
UniProt: A0AAI8MPF4
LinkDB
Position
complement(1974912..1980326)
AA seq 1804 aa
MDFGQNKGAFSGNGSTTITGKDGTEFTIPQTPNFSASSNNGNLAAVGRGFAVTANHVVNF
TPSYDTLGTYRTFDLSTYKIADTSGGTGISRPYGRDEKFTRFDKYVVEGQVDMLDFENSI
ESKKPTQESKNIESFKTLINNLAKDNEDNVYLYQAGSGIITLRGNTNTNINRIENGETKG
GGFGTLIKDSAKYESLVLPSTFCNNETQNCSVRGIMFKYASNLDFNNRITSGDSGSGIYA
YDNKNKKWILLGVVSQSTGTETNAGNVANIAAVSNKDLQDYQSKFEQKIDLKMTEPNTIE
WTLNNTTLKFEKRGDTPDKTYNLEANKDLIFSGGGTIKVQSNIYRNTSGYAGGFVFADAT
TKTTYKFTNEQGKNYSFIGSGLDIGENVVVEWHLRNGEIKNNGKTTYDSLHKIGKGELVI
KTENTTTTGLGTLKIGEGKVTLDTTTKAFDNIYITSGRGELALKQAEALGATKNTNSASG
TTSANSYTLSQNKNSEMGFYFGKGGGKFDLAGNSLVLNTIAANDSGAIITSTSTTKATLE
IQGLGYDSSGNKKITKENTIIHASIGDNTNGANGTNLNLIYKGDKTAANRHSEGANATEE
SKSNRLDSSATLSPQNDKARASLIFDGNINTSGKMEVTNGNIALQGHATTHATISDETIR
EQIKNAENGTQKPMPDYMDLSKPSTLNQPDWDNRTFKFGNGIDLKSSNLTLGRNASLESN
ITLDNSSKVEFGGSVKHFIDNKDGKNVTGSGFSYQQLVESNALSEEMQKIANETIHYKGK
ITATGGTIESHILDFNASLDLKNSANLTADYLTLTNTDSVSLDSTSSATTKTLKLQNVSD
SNLNTIFTNSNTTNSAKLKVTEALWFNSVSNFDLTKLDSANVKIKPNYDIIAEKSTITGA
NKDLSANVSLFEGANLSLKSLTLKDTKANEVTNGTTNAIKNSVYLQGKSTTDNNSQTNTT
TTKLTLNENLKAENLNEAKVILWGKSEISAPKIEFSNVKDGILALDKDSKLTSANGNANV
EVSGANSSLKIGILGDKSFDINAQGGSKIILSSLPLQDSEAKNPSSKNVNSSPTANFSGK
ITASGESSVESLLDTITASVILNKSDSNKNDNISGKPSLNAKNITLDSTHNEIYLGANST
LTAQTITAKSLANLTLNADSSATANITKFIFDGGENGTTTNLTGNLIGENIELKNASIVK
TSDLTFSKSANLTLDDTSKLEVANLNVNANLTLNFADSAKNTASLQKITLNNNANLNINS
WDFGNTTAFSSNGGGRVTFENATYTHNGTPKTISADSTISGELKLSNVGKDSNKGDDRFK
MLDFSDKNLTFGENSKVQVNLDSSVKKGDTSIKTDGTYYKLISTGDSGTITDNRTDKRID
FTNTDFFVVSKFIGNTLYVKFLASAPDSFAELNKNISHEQSRYSEILEALIQANPKDDAI
DTATRTDNYSVLDKRIQTIDSDLNEIAQGNKTRQTRNLLFSNDQTINTRISQVRLAQSGR
NKHLRFAQNDTMYRIQSLMQGAVRSDAMPSYARERELDLSNSVWLNVGGGYFGGDSKMGF
GATNIGYDRLIYAGSSDILLGAMFGFGGSNAYTGDMTDSAMFYNIGLYLHSIFDSQGGKY
GGHEIQSNISFSINDNRKTIESKSAKNTAFGTLFALYYKYNFILVQNDTISHALKPVVVL
ALGYNRNGAFEIDEYKQATYNSVNFSYGLGVEYNAVMSESFYSLALTLKDMAYSGGERVF
MSLSGAQNFIGYSLESAPRFSAEINLIGSHKLTDALYLQYGIAGMLDSGTNYGAKGDIKI
GYKF
NT seq 5415 nt   +upstreamnt  +downstreamnt
ttggactttgggcaaaataaaggtgcatttagtggcaatggtagtaccacgataacgggc
aaagacggcacggaatttacaatcccacaaaccccaaacttctccgcttcaagcaataac
ggcaatcttgcggcggtagggcgtggatttgcggttacggctaatcatgtggtaaatttc
acgcctagttatgatacactcggcacttaccgcacatttgatttaagcacttataaaatc
gctgatacaagcggtggcactggtatttcaaggccttatggtagagacgaaaaatttact
cgctttgacaaatatgtcgttgaagggcaagtggatatgcttgattttgaaaactctatc
gaaagcaaaaaacctacacaagaaagcaaaaatatagagagttttaaaaccttaattaat
aatcttgcaaaagataatgaggacaatgtttatctttatcaagctggttcaggtatcatc
actttaagaggcaacacaaatacaaacattaaccgaatagaaaatggcgagacaaagggc
ggcggttttggcactttgataaaagatagcgcaaaatatgaaagcctagttttgccaagt
acattttgcaataacgaaacgcaaaactgctctgtgcgtgggattatgtttaaatacgca
tcaaatttagattttaacaaccgcattacaagcggagatagtgggagtggaatttacgct
tatgataacaaaaataaaaaatggattttgctgggcgtggtatcacaatcaacaggaacg
gaaacaaatgcgggcaatgtagccaacatagctgccgtttcaaacaaggatttgcaagat
tatcaaagcaaattcgagcaaaaaattgatttaaaaatgacagagccaaatacaatcgaa
tggacactcaacaacactactttgaagtttgaaaaaaggggcgatacaccagataaaact
tataatttggaggctaataaagatttaattttcagcggtggcgggactattaaggtgcaa
agtaacatttaccgaaatacaagcggttacgctggtggctttgtctttgctgacgctacc
acaaaaacaacttataaattcacaaacgagcagggcaaaaactactcttttataggctct
gggcttgatataggcgaaaatgtcgtggtagaatggcatttgagaaatggggaaataaaa
aataatggcaaaactacatacgattctctccataaaataggcaagggcgaacttgtcatt
aagactgaaaataccacaaccacaggactaggcacgctgaaaatcggcgagggcaaggtt
acgctagatacgactacaaaggcttttgacaacatttacattacaagcggacggggcgaa
cttgcgcttaaacaggctgaggcgttaggcgcgacaaaaaacacaaattcagcaagtggc
acaacttcggcgaattcttacacgctatcgcaaaataaaaatagcgaaatgggcttttat
tttggcaagggcggaggcaagtttgatttggcgggcaactcgctagtgcttaacaccata
gccgcaaatgatagtggcgcaattatcactagcactagcacgacaaaggcaacgcttgag
attcaaggcttggggtatgattcgagcggtaataaaaaaattaccaaagaaaacaccata
atccacgcaagtatcggcgacaacacaaacggcgcaaacggcacgaatttaaatctcatc
tacaagggcgacaaaacggcggcaaatcgtcattctgagggagcgaatgcgaccgaagaa
tctaaaagcaatcgtttggattcttcggcgactttgtcgcctcagaatgacaaggcgagg
gcttcactaatctttgatggcaatataaatacgagtggcaaaatggaagttacaaacggc
aatatcgcattgcaaggacacgcaaccactcacgcgactataagcgatgagacaatccgt
gagcaaatcaaaaatgccgaaaacggcacacaaaagcctatgcctgattatatggattta
agtaagccatcaaccctaaatcaaccagattgggataatcgcacttttaaatttggcaat
ggcattgatttaaaaagctcaaatctcacgctagggcgcaatgcgagtttagaatctaat
atcacgctagataatagctccaaagtcgagtttggcggtagcgtaaagcacttcatcgac
aataaagatggcaaaaatgtaacgggcagtggctttagctatcagcagttagttgaaagc
aatgctttaagcgaggaaatgcaaaaaatcgcaaatgagactatacactacaaaggcaaa
attaccgcgacaggtggcacgatagaatcgcatattttggattttaatgcaagtttggat
ttgaaaaatagtgcgaatctcacagcggattatttgactttgacaaacaccgattctgtt
tcactagatagcacttcaagcgcaactaccaaaacgctaaaattgcaaaatgtaagcgat
agcaatttaaacacaatttttacaaatagcaacaccacaaatagtgcgaagctaaaagtt
accgaagcattgtggtttaatagcgtaagtaactttgatttaaccaaattagattcggca
aatgtgaaaataaaaccaaattacgacattatcgctgaaaaatccactattacaggcgca
aacaaagatttaagtgcaaatgtttcgctttttgagggtgcgaatctaagtctaaaaagc
cttacactaaaagatacaaaagcaaatgaagtaacgaatggcacaacaaatgcgattaaa
aatagcgtgtatttgcagggtaaatcaacaacagataataattcgcagacaaacactacc
accacaaaactcacgcttaatgagaatctaaaagcagaaaatttaaatgaagctaaagtg
attttgtggggcaaaagcgagattagcgcaccaaaaatcgaatttagcaatgtcaaggac
ggcattttggcacttgacaaagattcaaaactcacgagcgcaaatggcaatgcaaatgtc
gaagttagtggtgcgaattcaagcctaaaaatcggcattttaggcgataagagttttgat
ataaacgcacaaggtggtagcaaaataatcctttcgtcattgccattgcaagatagcgaa
gcgaaaaatccaagtagcaaaaatgtgaattcttcgcccaccgcgaattttagcgggaaa
atcaccgcgagtggcgaatctagcgtggaaagtttgttagataccattaccgcaagtgtg
attttaaataaaagcgatagcaataaaaacgacaatataagcgggaagcctagcttaaac
gcaaaaaatatcacactagattcgacacataatgaaatttatttgggcgcaaattcaaca
cttacagcacaaacaatcacggcgaaaagtctagcgaatcttacgctaaatgcagattct
agcgcaacggcaaatataaccaaattcatttttgatggcggagaaaacggcacgactacg
aatcttacaggcaatcttatcggcgaaaatatcgagctaaaaaatgcgagtattgtaaaa
acaagcgatttgacattcagcaaaagcgcgaatcttacgcttgatgacacttcaaaatta
gaagtggcgaatctaaatgtcaatgcgaatctaacgctaaattttgcagattcagcgaaa
aatacggcaagtttgcaaaaaatcactttaaacaataacgcgaatctaaatatcaattcg
tgggattttggcaacactacggcgttttcaagcaatggtggtgggcgtgtaacttttgaa
aatgccacttacacacacaatggcactccaaagactattagcgcagattccacgataagc
ggggaattgaagttatcaaatgtcggcaaggattcaaacaaaggcgacgacagatttaaa
atgcttgattttagcgataaaaatctcacttttggcgaaaactcaaaagtccaagttaat
ctagattcaagtgtaaaaaaaggcgatacaagcataaaaacggatggcacttattacaaa
cttataagcacaggcgatagtgggacaatcacggacaatcgcacggataagcgcatagat
tttacgaatacggatttctttgtcgttagtaaatttatcggcaatacgctttatgtaaaa
ttcctagcatctgcgccagattcctttgccgagctaaacaaaaacatttcccacgagcaa
agccgatacagcgagattttggaggctttgatacaggcaaatcccaaagatgatgccatc
gatactgccacacgcaccgataattacagcgtcctagataaacggattcaaactattgat
agcgatttaaatgaaatagcacagggcaacaaaacgcgtcaaacgcgcaatttgctcttt
tcaaatgaccaaacgataaatacacgcatttcgcaagtccgcctagcacagagtgggcgc
aataagcacttgcgatttgcgcaaaatgacactatgtatcgcattcaatccctaatgcaa
ggcgcagttagaagcgatgcgatgcctagctatgcacgtgagcgcgaattagacttgtca
aatagtgtgtggctaaatgtgggcggtggatatttcggtggggatagcaaaatgggcttt
ggtgcgacaaacatcggctatgataggcttatttatgcgggtagtagcgatattttgctt
ggtgcaatgtttggctttggtggctcaaatgcatacacaggcgatatgacagatagcgcg
atgttttataatatcgggctatatttgcatagcatttttgattcgcagggtggaaaatac
ggcggacacgagattcaaagcaatatcagttttagcattaacgataatcgcaaaactatc
gaatctaaaagcgcgaaaaatacggcatttgggacgcttttcgcactctattataaatac
aactttattttagtgcaaaatgataccattagccacgcgctaaaacctgtggtagttttg
gcgttaggctacaatcgcaatggcgcgtttgaaatcgatgaatacaagcaggcaacatat
aatagcgtgaatttttcctatgggcttggcgtggaatataatgccgtgatgagtgagagc
ttttatagtctagcactcacgctaaaagatatggcatatagtggcggtgagcgcgtattt
atgagtttaagcggagcgcagaattttatcggctacagccttgaatctgctccacgattt
agcgcagaaatcaatctcataggctcacacaagctaacagacgcgctatacttgcaatat
ggaatcgctggaatgctagatagtggcacgaattacggtgcaaaaggcgatataaagatt
gggtataaattttga

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