Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2104
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Entry
HCBAA847_2104 CDS
T02494
Symbol
msbA
Name
(GenBank) multidrug resistance protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCBAA847_2104 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcb02000
]
HCBAA847_2104 (msbA)
Enzymes [BR:
hcb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HCBAA847_2104 (msbA)
Transporters [BR:
hcb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HCBAA847_2104 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
AAA_29
AAA_22
nSTAND3
AAA_21
AAA_15
AAA
ABC_ATPase
G-alpha
nSTAND1
AAA_5
DUF815
AAA_19
AAA_16
AAA_30
MMR_HSR1
Catalase
AAA_7
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAM33321
UniProt:
A0AAI8MPK0
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All DBs
Position
1981650..1983377
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AA seq
575 aa
AA seq
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MRTFFDFFKKYIPYIQGHTFSFIIAISASLVVAACTAGIAYLIEPLLDTLQGKTPRATPF
FSFEELAQDDKMALAMMLMIIGVYFGKSVGTYIQTYFMNLIGQDIVRQLRDRMLDHMLSL
EMAFFNKMRGGELIARITNDIGLIRSAVSNYITEFVREGISIIGLVVIVIYQSPKYALIG
LVIMPLAIIPLSLIIKKLKKYSRNIQEKNADITSKLNEIFNNVEVIKASNGEKLEYENFK
SQNLHFLKISMKAVRVGELSTPLMELLGAIMLGCVLYMAIVDISQGELSAAQFSSFVGAL
FLIFTPFKRLVNLYTQMQIAIVASDRIFEILNQKQQIKDGDLVLQAPIHSIDFNNVHFHY
NEETHALKGVNLNFRKNKITALVGKSGSGKSSIINLILRLYEANEGLITLNNRDIKDYTQ
KSVRDNMAVVTQRIFIFHDSIIHNVAYGSKIDEKKAIEALKYAHAWDFVSQMPEGIHTIL
DEFGTNLSGGQRQRIAIARAIYKNPEVLIFDEATSALDSQTEEAIKESIEQLRQDKIIII
IAHRPSTIELADEVFHLKEGKIIKTETRSLQSFRT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacattttttgacttttttaaaaaatatattccctatattcaagggcatacattt
tcatttattatcgctattagtgcttcacttgtagttgctgcctgcacagcggggattgcc
tatctcattgagccacttttagataccttgcagggtaaaacgccacgagctacgccattt
tttagctttgaagaattagcacaagatgacaagatggcattagctatgatgcttatgatt
atcggcgtgtattttggtaaatctgtggggacatatatccaaacatattttatgaatctt
attgggcaggacattgtgcggcaactccgcgatagaatgctagatcatatgctttcactt
gaaatggcgttttttaataaaatgcgtggaggagaattgattgctagaatcacaaatgat
attgggcttatccgctcggctgtatcaaactacatcacagaatttgtgcgtgaaggtata
agtattattgggcttgttgtgattgtgatttatcaaagtccaaagtatgcgctcattggg
cttgtcattatgccactagccattataccgcttagtcttatcatcaaaaagctcaaaaaa
tactcacgcaatatccaagaaaaaaatgcggatattacttcaaaactcaatgaaattttt
aataatgtagaagttattaaggcaagtaatggtgaaaagctagagtatgaaaattttaaa
tcacaaaatctgcattttcttaaaatcagtatgaaagctgtgcgtgtgggggagctaagc
acacctctaatggagcttttaggtgcgataatgctaggctgtgtgctgtatatggcaatc
gttgatatttcacaaggagagctaagtgcggcacaattctcatcatttgtgggggcgtta
tttcttatttttacaccttttaaacgccttgtcaatctctatacacaaatgcaaattgct
attgtcgcaagtgatagaatctttgaaatccttaatcaaaaacaacagataaaagatggg
gatttggtgctacaagcccccattcatagtattgattttaacaatgtgcattttcactat
aatgaagaaactcacgccctaaaaggtgtgaatcttaactttagaaaaaataaaatcact
gcacttgtaggaaaaagtggcagtggcaaaagctcaattatcaatctcattttgcgactt
tatgaagcaaatgaagggcttatcacccttaacaatcgcgatattaaagactatacgcaa
aaaagtgtccgtgataatatggcggtggtaacgcaaagaattttcatattccacgatagc
attattcacaatgtcgcctatggaagcaagatagatgaaaaaaaggctattgaagcactc
aaatacgcacacgcttgggattttgtaagccaaatgccagaagggatacatacaatcctt
gatgaatttggcacaaatcttagcggagggcaacgccagagaatcgctattgctagggcg
atttataagaatcctgaagttttaatttttgatgaggcgacttctgcacttgattcacaa
actgaagaggcaataaaagagagtatagaacaactaaggcaggacaaaattattattatc
atcgctcatcgtccaagcaccatagagcttgctgatgaagtcttccatctcaaagaaggt
aagattatcaaaacagaaactcgctcgttgcaatcttttagaacataa
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