Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2129
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Entry
HCBAA847_2129 CDS
T02494
Name
(GenBank) conserved hypothetical protein
KO
K09778
Kdo2-lipid IVA 3' secondary acyltransferase [EC:2.3.1.-]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb00540
Lipopolysaccharide biosynthesis
hcb01100
Metabolic pathways
Module
hcb_M00866
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HCBAA847_2129
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcb01005
]
HCBAA847_2129
Lipopolysaccharide biosynthesis proteins [BR:
hcb01005
]
Lipid A
HCBAA847_2129
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Gene cluster
GFIT
Motif
Pfam:
DUF374
DUF6796
Motif
Other DBs
NCBI-ProteinID:
BAM33345
UniProt:
A0AAI8QI00
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All DBs
Position
complement(2003054..2003704)
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AA seq
216 aa
AA seq
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MAVISRETKRKILGKIIPPLMLVLVWVLYILSRHRFFISPQTSGENIIGAFWHGEFCMLP
FLYKKLRKQMQQGRDKGFYIIASHHFDAQLMVSLCEYFKLKPLRGSTTRGGLKVLIDSLK
LLRNGYDIGIAPDGPKGPYHSIGDGVIAMSQKTQKRIIPMRVVYSRYWELKTWDKFKIPK
PFSRIDFYALDGFVVPRDMNLDDAKALLLSHLEKEL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgattagtcgcgaaacaaagcgtaagattctaggtaaaattattccgccgttg
atgcttgtgcttgtgtgggttttgtatattttaagccgacatcgcttttttattagccca
caaacaagtggtgaaaatatcatcggtgcattttggcacggggaattttgtatgctacca
tttttgtataaaaagctaagaaaacaaatgcagcaggggcgtgataaaggattttacatt
attgcttcccatcattttgatgcacaattaatggtgagtttatgcgagtattttaagctc
aagcctttgcgtggctcaacaacgcgaggtgggctaaaagtgcttatagattctcttaaa
ttgcttagaaatggctacgatataggtatcgcccctgatggaccaaagggaccatatcac
agcataggcgatggcgtaatagcaatgagccaaaagacgcaaaaacgcattattcctatg
cgtgtggtgtatagtcggtattgggagttaaagacttgggataagtttaagattccaaag
ccattttcaaggattgacttttatgccctagatggttttgtcgtgccaagagatatgaat
ctagatgatgcaaaggctttgcttctttcacatttagaaaaggaactctaa
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