Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2130
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Entry
HCBAA847_2130 CDS
T02494
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcb03016
]
HCBAA847_2130
Enzymes [BR:
hcb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HCBAA847_2130
Transfer RNA biogenesis [BR:
hcb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HCBAA847_2130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAM33346
UniProt:
A0AAI8MQ55
LinkDB
All DBs
Position
complement(2003705..2005063)
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AA seq
452 aa
AA seq
DB search
MKLFIQTLGCAMNERDSAHIIAELKEKKQYTLTDNAKEADLILINTCSVREKPEKKLFSE
IGQFAKEKKSGAKIGICGCTASHLGEEIIKKAPSVDFVLGARNVSKITQVLDRPKAVEVD
IDYDDSTYVFASSQDMGIKAHLNISIGCDKKCSYCIVPFTRGKEISIPIDLLVNEAKKLV
ANGAKELLLLGQNVNHYGVRFSTPHKKTNFTELLATLSEIEGLYRIRFTSPHPLHMDDEF
LEEFARNPKIAKGIHIPLQSGSSQILKMMRRGYDKQWYLDRIAKLKSLLPNVGIGTDIIV
GFPTESEQDFEDTMEVLSIVEFDTLYSFVYSPRPHTSAYSYDKSMLVPQEVAKERLSRLQ
NLHKQILQKKAQKEIGSIYEVLIENHRDDEGQTWSEGRSSQNKLIKILGRKCPIGSIIQV
KVTHNDGGGLYGEFVRELSLEQALQANVYKSV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttatacaaactttgggctgtgcgatgaatgagcgagattcagcacatatc
attgctgaattgaaagaaaagaagcaatacacacttactgataatgctaaagaggcggat
ttaatccttattaacacctgctctgtgcgtgaaaagcctgaaaaaaagctattttcggaa
attgggcagtttgctaaggagaaaaaatctggcgcaaagataggaatctgcggctgcacg
gctagtcatttgggcgaagagattattaagaaagctcctagtgttgattttgtgcttggg
gctaggaatgtctctaaaatcacgcaggtgcttgatcgtccaaaagctgtggaggtagat
atagactatgatgatagcacttatgtgtttgcttcatcacaagatatggggattaaagct
catcttaatatctcaataggctgcgataaaaaatgtagctattgcatcgtgcctttcacg
cgtggcaaggagatttcaattcccatagatttgcttgtaaatgaagctaaaaagcttgtg
gcaaatggggcaaaggagttgcttttgctagggcagaatgtcaatcattatggcgtaagg
ttttctaccccgcataaaaagacaaacttcacagagcttttagcgactttaagcgagatt
gaagggctatatagaatccgctttacttcaccgcatcccttgcatatggacgatgagttt
ttggaagaatttgctaggaatccaaaaattgctaaaggcatacatattcctttgcagagt
ggttcaagccagattctaaaaatgatgagacgcggctatgataagcagtggtatttagac
agaattgcaaagcttaagtccctgctcccaaatgttggcattggcacggatattattgta
ggcttccccactgaatctgaacaagactttgaagacacaatggaggtgctatcaatcgtt
gaatttgatacgctttatagttttgtgtattctccgcgtccgcatacaagtgcgtatagc
tatgataagagtatgcttgtgcctcaagaggtggctaaagagcgattaagtcgattacag
aatctccataagcagattctacaaaaaaaggcacaaaaagaaattggctcaatctatgag
gtgctgattgaaaatcaccgcgatgatgaggggcagacttggagtgaggggcggagcagt
caaaataaacttataaagatcctaggcagaaaatgccccattggctcaattattcaagtc
aaggttacccataatgatggcggtgggctgtatggggagtttgtaagagagctaagtttg
gaacaagccttgcaagcaaatgtatataaaagtgtataa
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