KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2198
Entry
HCBAA847_2198     CDS       T02494                                 
Symbol
fokI
Name
(GenBank) modification methylase
  KO
K06223  DNA adenine methylase [EC:2.1.1.72]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HCBAA847_2198 (fokI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcb03032]
    HCBAA847_2198 (fokI)
   03400 DNA repair and recombination proteins [BR:hcb03400]
    HCBAA847_2198 (fokI)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcb02048]
    HCBAA847_2198 (fokI)
Enzymes [BR:hcb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.72  site-specific DNA-methyltransferase (adenine-specific)
     HCBAA847_2198 (fokI)
DNA replication proteins [BR:hcb03032]
 Prokaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    HCBAA847_2198 (fokI)
DNA repair and recombination proteins [BR:hcb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HCBAA847_2198 (fokI)
Prokaryotic defense system [BR:hcb02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    HCBAA847_2198 (fokI)
SSDB
Motif
Pfam: MethyltransfD12 DUF7660
Other DBs
NCBI-ProteinID: BAM33413
UniProt: A0AAI8MPI9
LinkDB
Position
2074911..2075807
AA seq 298 aa
MHHIKSPLNYIGGKYKILSQILPLFPKRIDTFIDVFCGGCNVAVNVNAKRILANDNLSYL
IALLKFLQQNPLEKTLQEIEQIIHFYALSKENAEGYKLLRDDYNTRKLPLKLLALIAFSF
NHQIRFNNAHHFNTPFGRNRSSFNPQMQINLIAFIQSLQQINITLFSLDFSEVFSTLDSM
QDKEIFVYCDPPYLITQGTYNDGKRGFSGWNESLEKDLLNYLSKLDSKGILFGLSNVLTH
KGRENKLLKEWLEKHDFYIHTIQAHYTNANYQAKYRDKQHTQEVFITNYKADNAFYWQ
NT seq 897 nt   +upstreamnt  +downstreamnt
atgcaccatatcaaatctccgctcaattacattggcggaaaatacaaaatcttatcccaa
atcctacctttatttcctaaaagaattgatacttttatagatgtattttgtgggggttgt
aatgtagcagttaatgtcaatgccaagcgaattttggcaaatgataatttaagttatctt
atcgctcttttaaaatttttacaacaaaatcctttagaaaaaacactgcaagaaatagag
caaatcatacatttttatgctttaagcaaagaaaatgcagagggttataaacttttaaga
gatgattataatacccgtaagcttcctttaaaattacttgctcttattgcctttagcttc
aatcatcaaatacgctttaataatgcccaccattttaacaccccttttggcagaaatcgc
tcaagttttaacccacaaatgcaaatcaatctcatcgcttttatacaatccttacaacaa
ataaatatcacactttttagccttgattttagtgaagtttttagcactttagattctatg
caagataaagaaatatttgtgtattgcgacccaccctatcttatcacgcaaggcacttat
aatgatggcaaaaggggctttagtggctggaatgaaagcttagaaaaagatcttttaaat
tatcttagcaaactagattctaaaggtattctctttggactttcaaatgtccttacccat
aaaggaagggaaaataagcttttaaaagagtggttagaaaagcatgatttttatatccac
accatacaagcacactatacaaatgcaaattatcaagcaaaatatagggataaacaacat
acgcaagaagtattcattacaaattacaaggcggataatgcgttttattggcaataa

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