Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2246
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Entry
HCBAA847_2246 CDS
T02494
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCBAA847_2246 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_2246 (ung)
Enzymes [BR:
hcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HCBAA847_2246 (ung)
DNA repair and recombination proteins [BR:
hcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HCBAA847_2246 (ung)
Prokaryotic type
HCBAA847_2246 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM33461
UniProt:
A0AAI8QH89
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All DBs
Position
complement(2117672..2118382)
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AA seq
236 aa
AA seq
DB search
MSIELDKVKIPQDWKNLLKDELLSPYFAEIKSHYMDALARGELVYPLPKDIFAAFCLTSL
ENLKVIILGQDPYHGYAMVNGECVPQAMGLSFSVPRGVPIPPSLKNIYKELAQTLHITPP
LHGDLSAWAKQGVLLLNSILSVKAHSPASHKHFGWEDFTDGVIRALSQNKQNLVFMLWGN
YAKKKAVLIDSTKHKIITAPHPSPLAQGFVGSNVFVNANVYLQECSKSPIDWGRFD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgagttagataaagtaaagattccacaggattggaaaaatctccttaaagat
gagcttttaagcccgtattttgccgagattaaatctcattatatggacgcccttgctaga
ggcgaacttgtctatccactgccaaaagatatttttgctgccttttgccttacctcactt
gaaaatctcaaagtcattatacttgggcaagatccctatcacggctatgctatggtgaat
ggagagtgtgtcccacaagctatgggcttaagctttagtgtgccgcgtggagtgcctatc
ccaccttcgcttaaaaatatttataaagaactcgcacagactttgcatatcacgccaccc
ttgcacggggatttaagtgcttgggcaaagcaaggtgttttattgcttaatagcattttg
agtgtcaaggcacattctccggcttcacataagcattttggttgggaagattttaccgat
ggtgtgattagggcattatcgcaaaacaagcagaatcttgtctttatgctatgggggaac
tatgctaagaaaaaggcggttttgatagattctactaaacataagattatcaccgctccg
caccctagcccactggcacaaggttttgtggggagcaatgtctttgtgaatgctaatgtg
tatttgcaagaatgctctaaaagccctattgattggggcagatttgattaa
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