Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2253
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Entry
HCBAA847_2253 CDS
T02494
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCBAA847_2253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_2253
Enzymes [BR:
hcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HCBAA847_2253
DNA repair and recombination proteins [BR:
hcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HCBAA847_2253
Prokaryotic type
HCBAA847_2253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
NUDIX_4
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BAM33468
UniProt:
A0AAI8MPP5
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All DBs
Position
2123343..2124386
Genome browser
AA seq
347 aa
AA seq
DB search
MNTNPAHKAKGIAKQYQIQLLEWYAIQGRTSLPWRTLKGENAPYGVYVSEIMLQQTQVKR
VQEHYFTPFLNAFPTLESLAKASLDSILKQWEGLGYYTRARNMQKAAILCCEKYNATLPN
TRKDLLKLPGIGAYTSGAILCFGFHQSVSFVDGNIRRVLCRIFALREPNQKLLDGLAFLL
LDTKHSFDYNQALLDLGAMICTPKSPNCLICPMQNLCNGKVNPTLYPTPKTSSSTPLTLH
LLLYKDSKGRIAFVYEKGDKGGLYQGLYNLPQLKLEALANKQRFYKCGSFKHHYTKYAIT
ANVYKLDSKHLNLLTQSLPHTKLYFFSQKELESRPLSSLCKKALEFV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaatcccgcacacaaagcaaaaggcattgctaaacaataccagattcaactc
ttagaatggtatgcgatacagggcagaacttctcttccttggcgaaccctaaaaggtgaa
aatgccccttatggcgtgtatgtaagtgagataatgttgcaacaaacgcaagtaaaaaga
gtgcaagaacactatttcaccccatttttaaacgcctttcccacactagaatccttagca
aaagcaagtctagattctatactcaagcaatgggagggcttaggctattacactcgtgcg
agaaatatgcaaaaagcggcgattctttgctgtgaaaaatataatgctactttgcctaat
acacgcaaagatttgcttaaactgcccggaattggggcatatacttcaggggcgatttta
tgctttggttttcatcaaagtgtgagttttgtagatgggaatattagacgggttttgtgt
agaatctttgcattacgcgaacctaaccaaaagcttttagacgggcttgcatttttgctt
ttagacacaaaacacagctttgattataatcaagccttgcttgatttgggtgcgatgatt
tgtacgccaaaatcgcctaattgccttatctgccctatgcaaaatctctgcaatggcaag
gtaaatcctacgctctatccaactccaaaaacttcttcttcaaccccacttacactgcat
cttttgttatataaagattctaaaggcaggattgcctttgtgtatgaaaaaggggataaa
ggtggcttgtatcaaggcttatacaatctcccacaacttaagctagaagcacttgcaaat
aagcaaagattctataaatgcggcagtttcaagcaccactacacaaaatacgctatcacc
gcaaatgtatataaactagattctaaacacttaaatctattaacgcaatccctgccacac
acaaaactatatttcttttcacaaaaagagctagaatctagaccactttcatcactctgc
aaaaaggcattggagtttgtgtag
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