KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2278
Entry
HCBAA847_2278     CDS       T02494                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification enzyme
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcb02048]
    HCBAA847_2278 (hsdR)
Enzymes [BR:hcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HCBAA847_2278 (hsdR)
Prokaryotic defense system [BR:hcb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HCBAA847_2278 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD CLP1_P
Other DBs
NCBI-ProteinID: BAM33493
UniProt: A0AAI8QI75
LinkDB
Position
complement(2145711..2148788)
AA seq 1025 aa
MSKINEESIEELLLETLGSFGYECKNAKEVVRKKDEWIIKEIFLDSIMRINFESKSNYDF
LSLEQKEHLALEAYKKILALSDEEDLMSANAKMHAYLIGGITLEAMVNSEQRGINLELLD
FENVENNAFLALNQFVFSPKDSVRCDILVFVNGVPLVLCELKHPLDINADLHKAYLQIET
YKEKAKELFIPNALCIISDGVDSRLGSLNADFTRFLKWQGQGDMLSENTRVVDICEVLKP
CVLLDFLRYFITYEQSYTQDTQGYKESKLNKKIAAYHQYYAVNKAIESARKAMQSSETNK
KGGVVWHTQGSGKSLSMVFFCAKALKELNNPTLLLLTDRTDLDNQLFNTFAKSSTLLQTK
PLQCESTKELKETFKQRKGGIIFSTMQKFRDENERFELLSQRGDIIVIADEAHRTQYGFS
ARLRSESLAYGYAQNVRDALPNATYIGFSGTPLEKDNANTRNVFGDYIDIYDFQKAVDDG
ATLPLFYESRLAKLHLSEEGKKLIESFDTDNTQGSLLKLQDIIGAKERLKNIAKDILEHF
NARKEKLKGKAMIACSSREIAVDLYNELVGLEPSLHSDDYTTGRAKVIITSSASDGAKLS
KFHTSKEEQRYIANRANDINDCLEFIIVCDMWLTGFDAPPLHTLYIDKPMKGHTLMQAIA
RVNRVYKDKPSGLIVDYIGIMAELQKALQFYTQGKSQNFLVDKQKLVEVVYEKHEVLKQM
LHGFEYMGYFQADTRGKLDLLSQITDKILSDEELKKRFLDEVVKLVKAYIMVLPNDEIQK
LSKEIAFFELLKNRIKKSEYSKAQADNALKQSLIKQVIDKELVSEGMIDILDKSQIKTEN
ISILSNEFLEGMRHYKYPHIALETLRKLLNDELQARIPKELKSKGLYEKLHQILMQYQNK
LIDAAKVIEELIELSQELIASDEKKQDSGLSDYEYAFYEALSEFKEVEEIMGVEKLRELS
KAVFFTIKENVTLDWTLRESVRAELRLAVKKVLKKYGYPPNSIQLGVDNAIKQAELIAQE
LMGEK
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgtcaaaaattaacgaagagagcatagaagagctattattagagactttggggagtttt
ggctatgaatgcaaaaatgcaaaagaagtcgtaaggaaaaaagatgaatggattataaaa
gagatatttttagattctattatgcgtataaactttgaatctaaaagcaattatgacttt
ttaagcttggagcaaaaagagcatttagcccttgaagcgtataaaaagattctagcctta
agcgatgaagaagacttaatgagtgctaatgcgaaaatgcacgcatacttgataggtggc
attacactagaggcaatggtaaatagtgagcaaagggggattaacctagagttactagac
tttgagaatgtagaaaataacgcctttttagcactcaatcagtttgtatttagccccaaa
gattctgtgcgatgtgatattttggtatttgtcaatggagtgcctttggtgctatgtgag
ctaaaacacccgcttgatataaacgcagatttacacaaagcatatttgcagatagaaacc
tataaggaaaaggcaaaagagctgtttatcccaaatgcgttgtgtatcataagcgatggg
gtagattctaggctcggtagtttgaatgcagactttacacgctttctaaaatggcagggg
caaggggatatgctaagtgaaaatacgcgtgtcgtggatatttgcgaagtattaaagcct
tgcgtgttacttgatttcttacgctattttatcacttatgagcaaagctatacacaagat
acacaaggctataaagaatctaaactcaataaaaagatcgccgcatatcatcaatactat
gctgtaaataaggcaatagagagtgccagaaaggctatgcaaagcagtgaaacaaacaaa
aaaggcggtgtagtatggcacactcaaggcagtggcaaaagtctatcaatggtgtttttc
tgtgctaaagccctaaaagagcttaataaccccacgcttttactactcacagataggacg
gatttagataatcaactctttaatacctttgcaaagtcaagcacacttttacaaacaaag
cccttgcagtgtgaaagcacaaaagagttaaaagaaacttttaagcaaagaaaaggcggg
ataatctttagcacaatgcaaaagtttagagatgaaaacgaacgctttgagcttttaagc
caaaggggagatattatcgtcattgctgatgaagcccaccgcacacaatatggctttagt
gcaagactgcgtagtgaatcccttgcctatggttacgcacaaaatgtccgcgatgccctg
ccgaatgctacttatataggctttagtggcacaccgctagaaaaagataatgcaaatacg
cgaaatgtgtttggagactatatagacatttatgattttcaaaaagccgtagatgatggt
gcaaccctgcctttattttatgaaagtcgtttagcaaagcttcatctaagcgaagagggc
aaaaagcttatagaatcttttgatacagataacacgcaaggcagtctcttaaagctgcaa
gatattatcggggcaaaagagcgattaaaaaacattgccaaagatattttagagcatttt
aacgcgagaaaagaaaagcttaaaggcaaggcaatgatagcgtgttctagcagagaaatt
gccgtggatttgtataatgagctagtagggcttgagccaagtttgcatagtgatgattac
acaacaggcagggcaaaggtcatcatcacttcaagtgcaagtgatggtgcaaagctatca
aagtttcacacaagcaaagaagagcaaagatatatcgcaaatagggcaaatgatataaat
gactgcctagagtttatcatcgtttgtgatatgtggctaacaggctttgacgcaccaccc
ttgcatacactctatattgacaaacctatgaaaggacacacccttatgcaagcaatcgca
agggtaaatcgcgtgtataaggacaagccctctggcttaatcgtagattatataggcatt
atggcagaactccaaaaagccctgcagttttacacacagggtaaatcgcaaaacttcctt
gtagataagcaaaagctagtagaagtcgtctatgaaaagcacgaagtattaaagcaaatg
ttgcacggctttgagtatatggggtattttcaagcagacacaaggggcaagcttgactta
ctctcacaaatcacagataagattttaagtgatgaagagttaaaaaagcgatttttagat
gaagtggtaaagctagtgaaagcctatattatggtgctaccaaatgatgagatacaaaag
ctttcaaaagaaattgccttttttgagttgctaaaaaatcgcattaaaaagagtgaatac
tccaaagcccaagctgataatgcactcaaacaaagccttattaagcaagtcattgacaaa
gagctagtaagtgagggtatgatagatattttagataaaagtcaaattaaaacagaaaat
atctctatcctttcaaatgagtttttagagggtatgagacattataaatatccacatatc
gcactagagactttacgcaaactcttaaatgacgagctgcaagcacgaatcccaaaagag
ctaaaaagcaaaggtttgtatgaaaaacttcatcagattctaatgcaatatcaaaataaa
ctcatagacgctgcaaaagtcattgaagagctaatagagctaagccaagaactcatcgca
agtgatgagaaaaagcaagattcaggcttaagcgattatgaatacgccttttatgaagca
ttgagtgagtttaaggaagtagaagagattatgggcgtagagaaactgcgtgagctaagc
aaagcggtattttttacgattaaagagaatgttacgcttgattggactttgcgtgagagt
gtgagggcagagctaagacttgcggtgaaaaaggtgctaaagaaatacggctatccgcca
aatagcatacagctaggcgtagataatgccatcaaacaagccgagcttatcgcacaagag
cttatgggggagaaataa

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