Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2353
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Entry
HCBAA847_2353 CDS
T02494
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcb03032
]
HCBAA847_2353 (gyrB)
03400 DNA repair and recombination proteins [BR:
hcb03400
]
HCBAA847_2353 (gyrB)
Enzymes [BR:
hcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCBAA847_2353 (gyrB)
DNA replication proteins [BR:
hcb03032
]
Prokaryotic type
DNA Topoisomerases
HCBAA847_2353 (gyrB)
DNA repair and recombination proteins [BR:
hcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCBAA847_2353 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
BAM33568
UniProt:
A0AAI8QI99
LinkDB
All DBs
Position
complement(2221068..2223386)
Genome browser
AA seq
772 aa
AA seq
DB search
MEKKEYQASNIKVLKGLEAVRKRPGMYIGDTNSGGLHHMIYEVVDNSVDEAMAGHCDRIN
ITLTMEGSAIIEDNGRGIPVDIHPTENLPAATLVLTTLHAGGKFDQDTYKVSGGLHGVGV
SVVNALSKKLIMTIKKNGHIYRQEFAQGIPQSELEIIGETKEHGTIIEFYPDDEVMEVLE
FDSQILTRRFKEMAYLNHNITIYFKDERTGQEESYHFDGGLKQFIQDVNTKPLVSLIISF
EALEQETEVEIALAYNEGYDEKVLSFVNNIRTPDGGTHEAGFRAGLSRAIMNYIEANANA
REKDSKVTGDDVREGLVAIISTKVIDPQFEGQTKGKLGSAFVKPIVQKLTYEKLAKFFEE
NPTEARIIMQKAIMAARGREAAKKARDLTHKKESFSVGTLPGKLADCQSKDPSESEIYLV
EGDSAGGSAKQGRDRAFQAILPLRGKILNVEKSRLDKILKSDEIKNMITAFGCGIGDEFN
IEKLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLKPLVENGHIYIAQPPLYRYKKGKTEI
YLKDERALSEYLVENGIGNFSFEGIGNKELLEVLKFIAHYRSILKELEKRYPMIDVVRYL
VENDSFDNLTLNELSQNIESYLQAKECNILNKITSEEQITLYVQTKVGLVELGINDSLFM
DNFFQEARFIYQKIADRDLDFLKGEDLIAFLEKIEESAKKDAYIQRYKGLGEMNPDQLWE
TTMTPANRTLLRVKIDNDADTDEIFTLFMGDEVEPRRAYIQEHAKDVKHLDV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaagaatatcaagcaagtaatattaaagttttaaaaggcttagaagcggtg
cgaaaacgccccggaatgtatataggcgatacaaactctggtggtttgcaccatatgatt
tatgaagtggtggataactccgtagatgaagctatggcagggcattgcgatagaatcaat
attacactcacaatggaaggtagtgccattattgaggataatggacgcgggattcccgta
gatattcacccaactgaaaatctccctgctgccacacttgtgcttacaacacttcacgct
ggagggaagtttgaccaagatacttataaagtctctggagggttacacggggtaggtgta
tctgtggtaaatgccttatctaaaaagcttattatgacgattaagaaaaatgggcatatc
taccgccaagagtttgcacaagggattccacaaagtgagctagagattatcggtgagaca
aaagagcacggcacgattatagaattttaccccgatgatgaggtaatggaagtgctagag
tttgattcacaaatccttactcgtagatttaaagaaatggcttatctcaatcacaacatt
acaatttattttaaagatgaacgcacaggacaagaagaatcttatcattttgatgggggc
ttaaagcaatttatccaagatgtgaatacaaagcccttagtctctttaatcattagcttt
gaagccctagagcaggaaactgaagtagaaattgccctagcttataatgagggctatgat
gagaaagtattaagctttgtgaataatattagaacacctgatggtgggacacacgaagcg
ggatttagagcggggctaagccgtgcgattatgaattatattgaagccaacgccaacgca
cgagagaaagattctaaagttacaggtgatgatgtccgtgaggggcttgtagccattatc
tctacaaaagtcattgatccgcagtttgaggggcagacaaaaggaaagctaggtagtgcg
tttgtaaaacctattgtccaaaagctcacttatgaaaaactcgctaaattctttgaagaa
aacccaacggaagctagaatcattatgcaaaaagccattatggcagctcgtgggcgagaa
gcggcaaaaaaagcacgagatcttacacacaagaaagaaagcttttcagtggggacattg
ccgggcaaattagcagattgtcaaagtaaagatcctagtgaatctgagatttatttagtt
gagggcgatagtgcgggtggtagtgcgaaacaagggcgagatagagcgtttcaagcgatt
ttgccattgcgtgggaagattctcaatgtggaaaaatctcgccttgataagattctaaaa
agtgatgaaattaaaaatatgattactgcttttggctgtggtataggagatgagtttaat
atagaaaagctccgctatcataaaatcattattatgactgatgctgatgtagatggtagc
catatccaaacgcttttaatgacatttttctatcgctatttgaaacctttagtagaaaat
ggacatatctatatcgcccagccaccactttatcgctacaaaaagggcaagacagaaatt
tatctcaaagatgaaagggcgttgagtgaatatcttgtagaaaatggtattgggaatttt
agctttgagggcattgggaataaagagcttttagaagtgctgaaattcatcgcccattat
cgctctatcctaaaagagcttgagaaacgctaccctatgattgatgtggtgcgttatctt
gtggaaaatgatagttttgataatctcactttaaatgaacttagtcaaaatatagaatct
tatctccaagccaaagaatgcaatattttaaataaaattacaagtgaagagcaaatcacg
ctgtatgtgcaaacaaaagtagggcttgtggagctgggcattaatgatagcttgtttatg
gataatttcttccaagaagcacgatttatttatcaaaaaatcgccgatagggatttagac
tttttaaaaggcgaagatcttattgcgtttttagaaaagattgaagaaagtgcgaaaaaa
gatgcctatatccaacgctacaaaggcttaggagagatgaatccagatcagctgtgggag
actacaatgacaccggcaaaccgcacacttttgcgtgtgaagattgataatgatgcggat
actgatgagattttcacactttttatgggcgatgaggtagagccaagacgagcctatatc
caagaacatgccaaagatgtaaaacacttagatgtgtga
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