Candidatus Hodgkinia cicadicola TETUND1: HCTETUND1_085
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Entry
HCTETUND1_085 CDS
T03595
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hcc
Candidatus Hodgkinia cicadicola TETUND1
Pathway
hcc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hcc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCTETUND1_085 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hcc03011
]
HCTETUND1_085 (rpsA)
Ribosome [BR:
hcc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCTETUND1_085 (rpsA)
Bacteria
HCTETUND1_085 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
IclR_C
Motif
Other DBs
NCBI-ProteinID:
AHL30911
LinkDB
All DBs
Position
complement(66230..67504)
Genome browser
AA seq
424 aa
AA seq
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MSHVCNAISKVLKHEATRRLLTNELVTGSVTHKNKAFMTVSIGYKRDAKVHSNGIWNYDS
YKANSNIQVYIEQVESQINETILSRRLLDSDEAWKALAQTKLQDLTTEGLIEAKVDDGYV
VKVLGLTALLPYSLIDESLRDCKLTGLKLKLKVSELNKLENFIKLSLPGSEKEKTTHQTL
CDNKEVWGALKETSETGVVLDLGERVGQVSLQNVQWHIAIELITEAKLGQLIGSRSEETS
SGKTELALLGAPILESGEQQVPIFSVITEAARQGLTIQTTTNTYGTVSAQQFNTLNMLEY
LEERGLELGDTIKTLPIKIDYAGKQTVVDIDIDSARCHKYVTLNEDSTVAGFVTGWCDNA
ITVALGGSLRGLIEMDTSEQAITACELLKDTLLELDVIDYDPSSNTISLQTVLDERTTAR
LVEA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgtttgcaacgcaataagcaaggttcttaaacacgaagcaactagaaggctc
ttaacaaatgagctggtaacagggagcgtaacgcacaaaaacaaggcgtttatgacagtg
agcatcggctataaacgcgacgcaaaagtgcacagtaatggcatatggaactatgacagc
tataaagcgaactccaacatccaagtttatattgaacaagtggagtcccaaataaacgaa
actatcttatccagaaggttattggactcggacgaggcatgaaaggcgttagctcaaaca
aaattacaagacttaactaccgaggggctaatagaagctaaggtagacgacgggtatgtt
gtcaaggtgttaggcttaacagcgttgctaccgtatagcttaatagatgaaagcttgcgc
gattgcaagctaacgggattaaaactgaaattgaaagtgtctgaattaaacaaattagaa
aactttattaaattgagcttacctggaagcgaaaaagagaaaacaactcaccagacttta
tgcgacaataaagaagtgtgaggcgcattaaaagaaacatcggaaactggcgtagtccta
gacttgggcgagcgcgtcggccaagtgtcgcttcagaacgtgcaatggcacattgccatc
gagttaataaccgaagctaagttaggtcaactgataggctcacggagcgaggaaacaagc
tctggcaaaacagagcttgcgttattaggcgcgccaatacttgaatcgggcgaacagcaa
gtgcctatctttagcgtaataacggaagcagcgcggcaagggcttacgattcaaaccaca
acgaacacatatggtactgttagcgcccaacaatttaacactcttaacatgttagaatat
ctcgaagagcgagggttagaattgggcgatacgattaaaacattaccaattaaaatcgac
tacgctggcaaacaaacagtagtcgacatcgacatcgactcggcgcgttgccacaaatac
gttactctaaacgaggacagcacggtagcgggctttgtcacagggtgatgcgacaatgct
attacggtcgctttgggcggtagtctgcgaggactgatagaaatggacacttcggagcag
gctataacagcgtgcgaattactaaaggacacacttctcgaactcgatgttatcgactat
gatccgagttcaaacacaataagtctacaaactgtgttagacgagcgaactacagcgcgt
cttgttgaggcgtag
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