Candidatus Hodgkinia cicadicola TETUND2: HCTETUND2_089
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Entry
HCTETUND2_089 CDS
T03596
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hcd
Candidatus Hodgkinia cicadicola TETUND2
Pathway
hcd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hcd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCTETUND2_089 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hcd03011
]
HCTETUND2_089 (rpsA)
Ribosome [BR:
hcd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCTETUND2_089 (rpsA)
Bacteria
HCTETUND2_089 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
AHL31034
LinkDB
All DBs
Position
complement(64710..65984)
Genome browser
AA seq
424 aa
AA seq
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MGHVCKAISKVLKHEATRRLLANELVTGSVTHKNKMFMTVNIGYKRDAKVHNSGVWNYDS
YKANSNIQVYIEQVESQINETILSRRLLDSDEAWKALAQTKLQDLTTEGLIEAKVDNGYV
VKVLGLTALLPYSLIDESLRDCKLTGLKLKLKVSQLNKLENSIKLSLPGSEKEKTAHRIS
CDNKEMWGALKETSETGVVLDLGERVAQVSLQNLQWHIAVELITEAKLGQLISLWSEKTS
SGEAKLALLGVPTLGLEERQAPIFSLITEATRQELTIQTTTNTYGTVSAQQLNTRNMLEY
LEKQGLESGDLIKTLPIKIDYAGKQTVVDIDIDSARCHKYVTLNEDSAVIGFVTGWCDNA
ITVALGYSLQGLIETDTSEQAITACELLKDTLLVLDVIDYNPSSNTISLQTVLDERTTAR
LVEA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggccacgtttgcaaagcaataagcaaggttcttaaacacgaagcaactagaaggctc
ttagcaaatgagctagtaactggaagcgtaacgcacaaaaacaagatgtttatgacagtg
aacatcggctacaagcgcgacgcaaaagtgcacaatagcggcgtgtggaactatgacagc
tataaagcaaattccaacatacaagtttatattgaacaagtggagtcccaaataaacgaa
actatcttatccagaaggttattggactcggacgaggcatgaaaggcgttagctcaaaca
aaactgcaagacttaacgaccgaggggctaatagaagctaaagtagacaacgggtatgtt
gttaaggtgttaggcttaacggcgttgctaccgtatagcttaatagacgaaagcttgcgc
gattgcaagctaacgggactaaaactaaaattaaaagtgtctcaattaaacaaattagaa
aactctattaaattgagcttacctggaagcgaaaaagagaaaacagcgcaccggatttca
tgcgacaataaagaaatgtgaggcgcattaaaagaaacatcggaaactggcgtagtctta
gacttgggcgagcgcgtcgcccaagtgtcgcttcagaatttgcaatgacacattgctgtc
gagttaataaccgaagctaagttaggtcaactgattagcttatggagcgagaaaacaagc
tctggcgaagcaaagcttgcgctgttaggcgtgccaacacttgggttggaggagcggcag
gcgcctatctttagcttaataacagaagcaacgcggcaagagcttacgattcaaaccaca
acaaacacatatggtactgttagcgcccaacaacttaacacccggaacatgttagaatat
ctcgaaaaacaagggttagaatcgggcgatctgattaaaacattaccaatcaaaatcgac
tacgctggcaaacagacagtagtcgacatcgacatcgactcggcgcgctgccacaaatac
gttactctaaacgaggacagcgcggtaataggcttcgttacaggatgatgcgacaacgct
attacagtcgctttgggctacagcctgcaaggactgatagaaacagacacttcggagcaa
gctataacagcgtgcgaattattaaaagacacacttcttgtactcgatgttatcgactat
aatccgagttcaaacacaataagtctgcaaactgtgttagatgagcgaactacagcgcgt
cttgttgaggcgtaa
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