Candidatus Hodgkinia cicadicola TETUND2: HCTETUND2_142
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Entry
HCTETUND2_142 CDS
T03596
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcd
Candidatus Hodgkinia cicadicola TETUND2
Pathway
hcd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCTETUND2_142 (dnaQ)
03430 Mismatch repair
HCTETUND2_142 (dnaQ)
03440 Homologous recombination
HCTETUND2_142 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcd03032
]
HCTETUND2_142 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hcd03400
]
HCTETUND2_142 (dnaQ)
Enzymes [BR:
hcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCTETUND2_142 (dnaQ)
DNA replication proteins [BR:
hcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCTETUND2_142 (dnaQ)
DNA repair and recombination proteins [BR:
hcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCTETUND2_142 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Maelstrom
RNase_H_2
Cas9_RuvC
Motif
Other DBs
NCBI-ProteinID:
AHL31079
LinkDB
All DBs
Position
complement(110329..110901)
Genome browser
AA seq
190 aa
AA seq
DB search
MTKLNKTTARELIIDTETTGLDYKKDRIVELAIVEFKLRGPIRELYHSYFNPEPIKVSKD
ALRIHGITNEFLSTKPKFESEANKITQIINNNKLLAHNAEFDKQMLTHELRLAHLDMPDV
CWCDTLKLAKSLNPNKSSSLRALCKKYKIKEINSKHDALSDCKMLALVYRALLNTQLQTA
CADSWFNNSA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcttaataaaacaacagcgagagagttaataatagacaccgaaacaaccgga
ttagattacaagaaagacagaattgttgagctagcgatagtggaatttaaactccgaggg
ccaattagagaattataccacagctattttaatcctgaacctatcaaagttagcaaagac
gcgctcaggatacacggtatcacaaacgagtttcttagcacgaaacccaaattcgagtct
gaagcaaacaaaataacacaaattataaacaacaacaagcttttagctcacaacgcagag
tttgataagcaaatgctcacccacgaactaaggttagcgcatttagacatgccagacgtt
tgctgatgcgacacattaaaacttgcaaagtcgctaaatccgaataaatcgagctcgctt
agagcgttgtgtaaaaaatacaaaataaaagagattaactctaaacatgacgctctgtct
gactgcaaaatgttagcgctagtttacagagcgctattaaacacacagttgcaaaccgcg
tgcgctgacagctgatttaacaacagcgcttaa
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